 |
Job Description | P61175 | Confidence | 5.76% | Date | Thu Jan 5 12:07:19 GMT 2012 |
Rank | 48 | Aligned Residues | 51 |
% Identity | 22% | Template | d1rh1a2 |
SCOP info | Toxins' membrane translocation domains
| Colicin
| Colicin
|
Resolution | 2.50 |
|
  |   |
17 | . | . | 20 | . | . | . | . | |
|
|
. | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  | . | . | . |
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | R | L | V | A | D | L | I | . |
. |
. |
R | G | K | . |
. |
. |
K | V | S | Q | A | L | D | I | L | T | Y | T | N | K | K | A | A | V | L | V | K | K | V | L | E | S | A | I | A | N | A | E | H | N | D | G | A | D | I | D | D | L |
Query Conservation |   |
  |   |   |
|   |   |   |
| . | . | . |
|
|   | . | . | . |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   |
|   |   |
|   |
|   |
|   |
|
|   |
|
|
|   |   |   |   |
|
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |
|
|
|   |
|   |
|
|   |   |   |
|   |
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |
| . | . |   |
|   |   |   |
|
Template Sequence |   |
S | R | E | I | A | E | N | I | N | N | F | Q | G | K | T | I | R | S | Y | D | D | A | M | S | S | I | N | K | L | M | A | N | P | S | L | K | I | N | A | T | D | K | E | A | I | V | N | A | W | K | A | . |
. |
F | N | A | E | D | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
348 | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | |
|
. | 400 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|