Job Description P61175 Confidence 100.00% Date Thu Jan 5 12:07:19 GMT 2012 Rank 7 Aligned Residues 107 % Identity 34% Template c3jywN_ PDB info PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein l17(a); PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution Resolution 8.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																																	40	.	.	.	.	.	.	.	.	.	50
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	K	H	R	H	A	R	S	S	A	Q	K	V	R	L	V	A	D	L	I	R	G	K	K	V	S	Q	A	L	D	I	L	T	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	K	A	A	V	L	V	K	K	V
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	A	R	G	S	Y	L	R	V	S	F	K	N	T	R	E	T	A	Q	A	I	N	G	W	E	L	T	K	A	Q	K	Y	L	E	Q	V	L	D	H	Q	R	A	I	P	F	R	R	F	N	S	S	I	G	R	T	A	Q	G	K	E	F	G	V	T	K	A	R	W	P	A	K	S	V	K	F	V	Q	G	L
Template Known Secondary structure								S	B													T	T	S	S	S	B													S	S	S			B				S			S	S			B		G	G	G		S	S	S			B		B
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	S	A	I	A	N	A	E	H	N	D	G	A	D	I	D	D	L	K	V	T	K	I	F	V	D	E	G	P	S	M	K	R	I	M	P	R	A	K	G	R	A	D	R	I	L	K	R	T	S	H	I	T	V	V	V	S	D	R
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		L	Q	N	A	A	A	N	A	E	A	K	.	G	L	D	A	T	K	L	Y	V	S	H	I	Q	V	N	Q	A	P	K	Q	R	R	R	T	Y	R	A	H	G	R	I	N	K	Y	E	S	S	P	S	H	I	E	L	V	V	T	E	K
Template Known Secondary structure													.	T	S		G	G	G												S		B							T	T	T							B			B
Template Predicted Secondary structure													.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions