Job Description P61175 Confidence 100.00% Date Thu Jan 5 12:07:19 GMT 2012 Rank 6 Aligned Residues 107 % Identity 30% Template c3iz5V_ PDB info PDB header:ribosome Chain: V: PDB Molecule:60s ribosomal protein l17 (l22p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome Resolution 5.50 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																																		40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	A	K	H	R	H	A	R	S	S	A	Q	K	V	R	L	V	A	D	L	I	R	G	K	K	V	S	Q	A	L	D	I	L	T	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	K	A	A	V	L	V	K	K
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	A	M	G	R	D	L	R	V	H	F	K	N	T	R	E	T	A	F	A	I	R	K	L	P	L	G	K	A	K	R	Y	L	E	D	V	I	A	H	K	Q	A	I	P	F	R	R	Y	C	G	G	V	G	R	T	A	Q	A	K	S	R	H	S	N	G	Q	G	R	W	P	A	K	S	A	R	F	I	L	D
Template Known Secondary structure											S												S		S			S													T	S	S					S	S			S	S					S			B	T	T	B	S		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	S	A	I	A	N	A	E	H	N	D	G	A	D	I	D	D	L	K	V	T	K	I	F	V	D	E	G	P	S	M	K	R	I	M	P	R	A	K	G	R	A	D	R	I	L	K	R	T	S	H	I	T	V	V	V	S	D	R
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		L	L	K	N	A	E	S	N	A	E	V	K	.	G	L	D	V	D	T	L	Y	V	S	H	I	Q	V	N	Q	A	Q	K	Q	R	R	R	T	Y	R	A	H	G	R	I	N	P	Y	M	S	S	P	C	H	I	E	L	I	L	S	E	K
Template Known Secondary structure														.	T			S	S															B							T	T	T							B											T	T
Template Predicted Secondary structure														.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions