Return to main results Retrieve Phyre Job Id

Job DescriptionP61175
Confidence8.00%DateThu Jan 5 12:07:19 GMT 2012
Rank40Aligned Residues15
% Identity40%Templatec2p1nD_
PDB info PDB header:signaling proteinChain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.
Predicted Secondary structure 



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Query Sequence  VRLVADLIRGKKVSQ
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Template Conservation 
  

  
 


 

Template Sequence  CQTVADMIKGKTPEE
Template Known Secondary structure  TT

Template Predicted Secondary structure 



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   118.120.........130..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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