Job Description P61175 Confidence 100.00% Date Thu Jan 5 12:07:19 GMT 2012 Rank 11 Aligned Residues 107 % Identity 34% Template c1s1iN_ PDB info PDB header:ribosome Chain: N: PDB Molecule:60s ribosomal protein l17-a; PDBTitle: structure of the ribosomal 80s-eef2-sordarin complex from2 yeast obtained by docking atomic models for rna and protein3 components into a 11.7 a cryo-em map. this file, 1s1i,4 contains 60s subunit. the 40s ribosomal subunit is in file5 1s1h. Resolution 11.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																																	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	I	A	K	H	R	H	A	R	S	S	A	Q	K	V	R	L	V	A	D	L	I	R	G	K	K	V	S	Q	A	L	D	I	L	T	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	K	A	A	V	L	V	K	K
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	A	S	A	R	G	S	Y	L	R	V	S	F	K	N	T	R	E	T	A	Q	A	I	N	G	W	E	L	T	K	A	Q	K	Y	L	E	Q	V	L	D	H	Q	R	A	I	P	F	R	R	F	N	S	S	I	G	R	T	A	Q	G	K	E	F	G	V	T	K	A	R	W	P	A	K	S	V	K	F	V	Q	G
Template Known Secondary structure											S	S		S	S	S	S	S	S	S	S	S	S	S	S	S	S		S	S	S	T	T	T	T	T						T	S	S					S	S	S		S	S						G	G	G		S	S	S	S						B	T	T	B	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	S	A	I	A	N	A	E	H	N	D	G	A	D	I	D	D	L	K	V	T	K	I	F	V	D	E	G	P	S	M	K	R	I	M	P	R	A	K	G	R	A	D	R	I	L	K	R	T	S	H	I	T	V	V	V	S	D
Query Conservation
Alig confidence														.
Template Conservation														.
Template Sequence		L	L	Q	N	A	A	A	N	A	E	A	K	.	G	L	D	A	T	K	L	Y	V	S	H	I	Q	V	N	Q	A	P	K	Q	R	R	R	T	Y	R	A	H	G	R	I	N	K	Y	E	S	S	P	S	H	I	E	L	V	V	T	E
Template Known Secondary structure		T	T	T	S	S	S	S					S	.	S	S		S	S	S										B											S	S	S										B
Template Predicted Secondary structure														.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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