Return to main results Retrieve Phyre Job Id

Job DescriptionP0AF50
Confidence3.74%DateThu Jan 5 11:25:10 GMT 2012
Rank84Aligned Residues22
% Identity18%Templatec2l06A_
PDB info PDB header:protein bindingChain: A: PDB Molecule:phycobilisome lcm core-membrane linker polypeptide; PDBTitle: solution nmr structure of the pbs linker polypeptide domain (fragment2 254-400) of phycobilisome linker protein apce from synechocystis sp.3 pcc 6803. northeast structural genomics consortium target sgr209c
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   82.......90.........100...
Predicted Secondary structure 




Query SS confidence 





















Query Sequence  YLDGSLPDSQIYYLVDASYQQA
Query Conservation   
       

  

  

 

Alig confidence 





















Template Conservation     
  
  
   

 





Template Sequence  AMKPGLSALEKNAVIKAAYRQI
Template Known Secondary structure  B

SS

Template Predicted Secondary structure 




Template SS confidence 





















   15....20.........30......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions