 |
Job Description | P33667 | Confidence | 99.65% | Date | Thu Jan 5 11:52:34 GMT 2012 |
Rank | 34 | Aligned Residues | 100 |
% Identity | 18% | Template | c3ippA_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:putative thiosulfate sulfurtransferase ynje; |
PDBTitle: crystal structure of sulfur-free ynje
|
Resolution | 2.40 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | R | H | T | E | Q | D | Y | R | A | L | L | I | A | D | T | P | I | I | D | V | R | A | P | I | E | F | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
H | G | A | M | P | A | A | I | N | L | P | L | M | N | N | D | E | R | A | A | V | G | T | C | Y | K | Q | Q | G | S | D | A | A | L | A | L | G | H | K | L | V | A |
Query Conservation |   |
  |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|
|   | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
A | E | L | A | K | P | L | T | L | D | Q | L | Q | Q | Q | N | G | K | A | I | D | T | R | P | S | A | F | Y | N | G | W | P | Q | T | L | N | G | P | S | G | H | E | L | A | A | L | N | L | S | A | S | W | L | D | K | M | S | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|
|
|
|
|
| B |
|  |  |  |  |  |  | T | T |
|  |  |  |  |
| S |
|  |  |  |  |  | T |
|
| S | S | T | T |
|
|
| S | B |
| T | T |
|  |  |
|
| G | G | G | G | G | G |
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |  |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | I | R | Q | Q | R | M | D | A | W | R | A | A | C | L | Q | N | P | Q | G | I | L | C | C | A | R | G | G | Q | R | S | H | I | V | Q | S | W | L | H | A | A | G | I | . |
D | Y | P | L | V | E | G | G | Y | K | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   | . |   |
|   |   |
|   |
|
|
|
|
|
|
Alig confidence |   |
. | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |
|
| . |   |   |
|   |   |
|   | . |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|   |   |   |
|
Template Sequence |   |
. |
. |
. |
E | Q | L | N | A | W | I | K | Q | H | N | L | K | T | D | A | P | V | A | L | Y | G | . |
N | D | K | D | V | D | A | . |
V | K | T | R | L | Q | K | A | G | L | T | H | I | S | I | L | S | D | A | L | S | E | P |
Template Known Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
| T | T | S |
|  |  |  |  | S | . |
|  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  | B | T | T | T | T |
|
| G |
Template Predicted Secondary structure |   |
. | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
| . |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
. | . | . | . | . | . | 110 | |
. | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|