Job Description P33667 Confidence 95.91% Date Thu Jan 5 11:52:34 GMT 2012 Rank 96 Aligned Residues 61 % Identity 18% Template c3flhC_ PDB info PDB header:structural genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein lp_1913; PDBTitle: crystal structure of lp_1913 protein from lactobacillus2 plantarum,northeast structural genomics consortium target3 lpr140b Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	I	D	V	R	A	P	I	E	F	E	H	G	A	M	P	A	A	I	N	L	P	L	M	N	N	D	E	R	A	A	V	G	T	C	Y	K	Q	Q	G	S	D	A	A	L	A	L	G	H	K	L	V	A	G	E	I	R	Q	Q	R	M	D	A	W	R	A	A	C	L	Q	N	P	Q	G	I	L	C	C	A
Query Conservation
Alig confidence									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	V	L	D	V	R	N	.	.	.	.	.	.	.	Q	I	K	G	A	I	A	X	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	D	L	A	T	R	I	G	E	L	D	P	A	K	T	Y	V	V	Y	D	W
Template Known Secondary structure									.	.	.	.	.	.	.			T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G	S		T	T	S							T
Template Predicted Secondary structure									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.																																				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		99	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		R	G	G	Q	R	.	S	H	I	V	Q	S	W	L	H	A	A	G	I	D	Y	P	L	V
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		T	G	G	T	T	L	G	K	T	A	L	L	V	L	L	S	A	G	F	E	A	Y	E	L
Template Known Secondary structure		T			S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions