Job Description P33667 Confidence 96.44% Date Thu Jan 5 11:52:34 GMT 2012 Rank 78 Aligned Residues 161 % Identity 20% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.											.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Query Sequence		I	V	L	I	G	G	C	T	G	S	G	K	T	L	L	V	Q	Q	Q	P	N	G	V	D	L	E	G	L	.	.	.	.	.	.	.	.	.	.	A	R	H	R	G	S	A	F	G	R	T	L	Q	P	Q	L	S	Q	A	S	F	E	N	L	L	A	A	E	M	L	K	T	D	A	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	G	E	R	V	A	L	L	P	M	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V	N	Y	D	H	P	D	A	F	D	L	A	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E	M	P	V
Template Known Secondary structure									T	T	S	S													G	G	G						G	G	G		B				T	T	S		T	T	S	S	S	S	S		T	T	S	G	G	G	B														T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
																206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Q	N	L	R	L	W	V	L	E	D	E	S	R	M	I	G	S	N	H	L	P	E	C	L	R	E	R	M	T	Q	A	A	I	A	V	V	E	D	P	F	E	I	R	L	E	R	L	N	E	E	Y	F	L	R	M	H	H	D	F	T	H	A	Y	G	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	D	F	R	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	.	.	.	.	.	.	.	E	L	R	D	L	M	D	L	K	V	F	V	D	A	D	A	D	E	R	F	I	R	R	L	K	R	D	V	L	E	R	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	T	T													S						S	T	T	T	T	S	S		.	.	.	.	.	.	.				T	T		S																							T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	G	W	Q	E	Y	C	E	Y	L	H	H	G	L	S	A	I	K	R	R	L	G	L	Q	R	Y	N	E	L	A	A	R	L	D	A	A	L	T	T	Q	L	T	T	G	S	T	D	G	H	L	A	W	L	V	P	L	L	E	E	Y	Y	D	P	M	Y	R	Y	Q	L	E	K	K	A	E	K	V	V	F	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	G	G	G	G	G	G		S					S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								151	.	.	.	.	.	.	.	.	160	.	.	.	.																						.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	W	A	E	V	A	E	W	V	K	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	Q	N	P	V	A	L	E	M	L	A	A	K
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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