Return to main results Retrieve Phyre Job Id

Job DescriptionP33667
Confidence94.94%DateThu Jan 5 11:52:34 GMT 2012
Rank131Aligned Residues105
% Identity9%Templatec3a4mB_
PDB info PDB header:transferaseChain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase
Resolution1.79 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   144.....150.........160.........170......... 180.........190.........200.........210.....
Predicted Secondary structure 



















........













Query SS confidence 



































. . . . . . . .



































Query Sequence  IVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAF. . . . . . . . GRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLE
Query Conservation    

 
 

 


 

     







 



 
........
     




 


 
   
             

Alig confidence 





















.....








........




























..




Template Conservation 

 
 
  






   
   .....     
 
                                      ..     
Template Sequence  LIILTGLPGVGKSTFSKNLAKI. . . . . LSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNY. . WVIVD
Template Known Secondary structure 

TTSS.....TT


TTTSSS

TTTTS..
Template Predicted Secondary structure 





.....








..
Template SS confidence 















































































   6...10.........20....... ..30.........40.........50.........60.........70... .....
 
   216...220.........230.........240. ........250.....
Predicted Secondary structure 










.

Query SS confidence 

























.













Query Sequence  DESRMIGSNHLPECLRERMTQAAIAV. VEDPFEIRLERLNE
Query Conservation   

  

   

  
   
  
  
 .
    
 

  
  
Alig confidence 

























.













Template Conservation                                       
   
Template Sequence  DTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIE
Template Known Secondary structure  S


STT


Template Predicted Secondary structure 














Template SS confidence 








































   7980.........90.........100.........110.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions