Job Description P33667 Confidence 95.09% Date Thu Jan 5 11:52:34 GMT 2012 Rank 128 Aligned Residues 100 % Identity 21% Template c2h92C_ PDB info PDB header:transferase Chain: C: PDB Molecule:cytidylate kinase; PDBTitle: crystal structure of staphylococcus aureus cytidine2 monophosphate kinase in complex with cytidine-5'-3 monophosphate Resolution 2.30 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.																										.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	L	I	G	G	C	T	G	S	G	K	T	L	L	V	Q	Q	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	V	D	L	E	G	L	A	R	H	R	G	S	A	F	G	R	T	.	L	Q	P	Q	L	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	A	L	D	G	P	A	A	A	G	K	S	T	I	A	K	R	V	A	S	E	L	S	M	I	Y	V	D	T	G	A	M	Y	R	A	L	T	Y	K	Y	L	K	L	N	K	T	E	D	F	A	K	L	V	D	Q	T	T	L	D	L	T	Y	K	A	D	K	G	Q	C	V	I	L	D	N	E	D	V	T	D
Template Known Secondary structure									T	T	S	S												T	T																				T	T	S		S								T									T	T								T	T				G	G
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
																	188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	A	S	F	E	N	L	L	A	A	E	M	L	K	T	D	A	R	Q	N	L	R	L	W	V	L	E	D	E	S	R	M	I	G	S	N	H	L	P	E	C	L	R	E	R	M	T	Q	A	A	I	A	V	V	E	D	P	F	E	I	R	L	E	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.					.	.											.	.	.	.	.	.	.
Template Conservation																																						.	.	.					.	.											.	.	.	.	.	.	.
Template Sequence		F	L	R	N	N	D	V	T	Q	H	V	S	Y	V	A	S	K	E	P	V	R	S	F	A	V	K	K	Q	K	E	L	A	A	E	K	G	.	.	.	I	V	M	D	.	.	G	R	D	I	G	T	V	V	L	P	.	.	.	.	.	.	.	D	A	D	L	K	V	Y	M	I	A	S	V	E	E	R	A	E	R
Template Known Secondary structure		G	S	S	S	S											T	S																T	T			.	.	.					.	.		S	S							T	.	.	.	.	.	.	.	T		S
Template Predicted Secondary structure																																						.	.	.					.	.											.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.			.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		253	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		153	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions