Return to main results Retrieve Phyre Job Id

Job DescriptionP33667
Confidence92.71%DateThu Jan 5 11:52:34 GMT 2012
Rank208Aligned Residues63
% Identity17%Templatec2gaaA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:hypothetical 39.9 kda protein; PDBTitle: crystal structure of yfh7 from saccharomyces cerevisiae: a2 putative p-loop containing kinase with a circular3 permutation.
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   125....130.........140 ...... ...150.........160.......
Predicted Secondary structure 

..


.












..................................
Query SS confidence 















. .





.




















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  YKALRQTAIQATIELA. . QKPIVL. IGGCTGSGKTLLVQQQPNGVD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 




  
   
    ..     
.
 
 

 


 

     


..................................
Alig confidence 















..





.




















..................................
Template Conservation     
   
  

      
 
 

 


 








  
   

                                  
Template Sequence  THKLADDVLQLLDNRIEDNYRVCVILVGSPGSGKSTIAEELQIINEKYHTFLSEHPNVIEVNDRLKPMVNLVDSLKTLQP
Template Known Secondary structure  TTT
S


TTS


STT



TTS



SSTTS

Template Predicted Secondary structure 





































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   168.170.........180..... ..
Predicted Secondary structure  ..












..

Query SS confidence  . .

















. .

Query Sequence  . . LEGLARHRGSAFGRTLQP. . QL
Query Conservation  ..




 



 

     ..

Alig confidence  ..

















..

Template Conservation                  

     
Template Sequence  NKVAEMIENQGLFKDHVEDVNFQP
Template Known Secondary structure  TTT

GGGTT
TT


Template Predicted Secondary structure 


















Template SS confidence 























   85....90.........100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions