 |
Job Description | P33667 | Confidence | 84.81% | Date | Thu Jan 5 11:52:34 GMT 2012 |
Rank | 454 | Aligned Residues | 27 |
% Identity | 30% | Template | c2f55C_ |
PDB info |
PDB header:hydrolase/dna | Chain: C: PDB Molecule:polyprotein; |
PDBTitle: two hepatitis c virus ns3 helicase domains complexed with2 the same strand of dna
|
Resolution | 3.30 Å |
|
  |   |
140 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  | . | . | . | . | . |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | . |
. |
. |
. |
. |
K | P | I | V | L | I | G | G | C | T | G | S | G | K | T | . |
. |
. |
. |
. |
L | L | V | Q | Q | Q | P | N | G | V |
Query Conservation |   |
  |   | . | . | . | . | . |   |   |   |   |
|
|   |
|   |
|
|   |
|
|
| . | . | . | . | . |   |
|
|   |   |   |   |   |
|
|
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
P | P | A | V | P | Q | T | F | Q | V | A | H | L | H | A | P | T | G | S | G | K | S | T | K | V | P | A | A | Y | A | A | Q | G | Y | K | V | L |
Template Known Secondary structure |   |
|
|
|
|
| S | S |
| B |
|
|  |  |
|
|
| S | S | S | S | T | T | T | T | S |  |  |  |  |  | T | T | S |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|