Return to main results Retrieve Phyre Job Id

Job DescriptionP33667
Confidence95.73%DateThu Jan 5 11:52:34 GMT 2012
Rank101Aligned Residues94
% Identity13%Templatec2chgB_
PDB info PDB header:dna-binding proteinChain: B: PDB Molecule:replication factor c small subunit; PDBTitle: replication factor c domains 1 and 2
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   124.....130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  GYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKT
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Template Sequence  GQDEVIQRLKGYVERK. NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDER. . . GIDVVRHKIKEFARTA
Template Known Secondary structure  S
TT.


S
TTSSGGGTGGGTT
TT...
TS
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   21........30...... ...40.........50.........60.........70.........80 .........90......
 
   204.....210.........220.
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Query Sequence  DARQNLRLWVLEDESRMI
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Template Sequence  PIGGAPFKIIFLDEADAL
Template Known Secondary structure 
STT
S
TGGGS
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   97..100.........110....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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