 |
Job Description | P33667 | Confidence | 90.36% | Date | Thu Jan 5 11:52:34 GMT 2012 |
Rank | 299 | Aligned Residues | 35 |
% Identity | 31% | Template | c2c99A_ |
PDB info |
PDB header:transcription regulation | Chain: A: PDB Molecule:psp operon transcriptional activator; |
PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
|
Resolution | 1.9 Å |
|
  |   |
124 | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | |
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | K | A | L | R | Q | T | A | I | Q | A | T | I | E | L | A | Q | K | . |
P | I | V | L | I | G | G | C | T | G | S | G | K | T | L | L |
Query Conservation |   |
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   | . |   |   |   |
|
|   |
|   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|   |
|
Template Sequence |   |
G | E | A | N | S | F | L | E | V | L | E | Q | V | S | H | L | A | P | L | D | K | P | V | L | I | I | G | E | R | G | T | G | K | E | L | I |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |
|  |  |  |  |
|
| T | T | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|