Return to main results Retrieve Phyre Job Id

Job DescriptionP33667
Confidence94.82%DateThu Jan 5 11:52:34 GMT 2012
Rank134Aligned Residues94
% Identity23%Templatec1zu4A_
PDB info PDB header:protein transportChain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   126...130.........140.... .....150.........160.... ... ..170.....
Predicted Secondary structure 




.........









............


.........


Query SS confidence 


















. . . . . . . . .



















. . . . . . . . . . . .


. . . . . . . . .







Query Sequence  KALRQTAIQATIELAQKPI. . . . . . . . . VLIGGCTGSGKTLLVQQQPN. . . . . . . . . . . . GVD. . . . . . . . . LEGLARHR
Query Conservation 



  
   
        ......... 

 
 

 


 

     ............


.........




 

Alig confidence 


















.........



















............


.........







Template Conservation    
   
   
                

   
  
 




 



      
 

 

  
  
  
  

       
Template Sequence  DALVESLYQAYTDNDWYRIDFKENRLNIFMLVGVNGTGKTTSLAKMANYYAELGYKVLIAAADTFRAGATQQLEEWIKTR
Template Known Secondary structure 
S







TTS
SSTTSSTT




S
TTT
Template Predicted Secondary structure 





























Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   176...180.........190.........200.........210.........220
Predicted Secondary structure 





















Query SS confidence 












































Query Sequence  GSAFGRTLQPQLSQASFENLLAAEMLKTDARQNLRLWVLEDESRM
Query Conservation 

 

     




 


 
   
             

 

  
Alig confidence 




























.














Template Conservation                     
   
     .    
 







 
Template Sequence  LNNKVDLVKANKLNADPASVVFDAIKKAK. EQNYDLLLIDTAGRL
Template Known Secondary structure  S
TT

SSTT

.TT
S



G
Template Predicted Secondary structure 










.








Template SS confidence 












































   251........260.........270......... 280.........290....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions