Job Description P33667 Confidence 87.37% Date Thu Jan 5 11:52:34 GMT 2012 Rank 369 Aligned Residues 112 % Identity 19% Template c1qhiA_ PDB info PDB header:transferase Chain: A: PDB Molecule:protein (thymidine kinase); PDBTitle: herpes simplex virus type-i thymidine kinase complexed with2 a novel non-substrate inhibitor, 9-(4-hydroxybutyl)-n2-3 phenylguanine Resolution 1.90 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																															.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence																															.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		I	V	L	I	G	G	C	T	G	S	G	K	T	L	L	V	Q	Q	Q	P	N	G	V	D	L	E	G	L	A	.	.	.	R	H	R	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	R	T	L	Q	P	Q	L	S	Q	A	S	F	E	N	L	L	A	A	E	M	L	K	T	D	.	.	.
Query Conservation																															.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Alig confidence																															.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		R	V	Y	I	D	G	P	H	G	M	G	K	T	T	T	T	Q	L	L	D	I	V	Y	V	P	E	P	M	T	Y	W	R	V	L	G	A	S	E	T	I	A	N	I	Y	T	T	Q	H	R	L	D	Q	G	E	I	S	A	G	D	A	A	V	V	M	T	S	A	Q	I	T	M	G	M	P	Y	A	V	T	D	A
Template Known Secondary structure							S	S	T	T	S	S						T	T															T	T	S	S	S															T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
									205	.	.	.	.	210	.	.	.	.	.	.	.	.													.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.										.	.												.	.	.	.
Query SS confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.										.	.												.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	R	Q	N	L	R	L	W	V	L	E	D	E	S	.	.	.	.	.	.	.	.	.	.	.	.	R	M	I	G	S	N	H	L	P	.	.	E	C	L	R	E	R	M	T	Q	A	A	.	.	.	.	I	A	V	V	E	D	P	F	E	I	R	L	E	R	L	N	E
Query Conservation		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.										.	.												.	.	.	.
Alig confidence		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.										.	.												.	.	.	.
Template Conservation
Template Sequence		V	L	A	P	H	I	G	G	E	A	P	P	A	L	T	L	I	F	D	R	H	P	I	A	A	L	L	C	Y	P	A	A	R	Y	L	M	G	S	M	T	P	Q	A	V	L	A	F	V	A	L	I	P	P	T	L	P	G	T	N	I	V	L	G	A	L	P	E	D	R	H	I	D	R	L	A	K
Template Known Secondary structure				G	G	G								S														T								T	T	T	S	S											T						T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions