Job Description P33667 Confidence 87.77% Date Thu Jan 5 11:52:34 GMT 2012 Rank 352 Aligned Residues 140 % Identity 17% Template c1lw7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transcriptional regulator nadr; PDBTitle: nadr protein from haemophilus influenzae Resolution 2.90 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.														180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	I	G	G	C	T	G	S	G	K	T	L	L	V	Q	Q	Q	P	N	G	V	D	L	E	G	L	A	R	H	R	G	S	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	T	L	Q	P	Q	L	S	Q	A	S	F	E	N	L	L	A	A	E	M	L	K	T	D	A	R	Q	N	L	R	L
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.
Template Sequence		V	A	I	L	G	G	E	S	S	G	K	S	V	L	V	N	K	L	.	.	.	.	.	.	.	.	.	A	A	V	F	N	T	T	S	A	W	E	Y	G	R	E	F	V	F	E	K	L	G	G	D	E	Q	A	M	Q	Y	S	D	Y	P	Q	X	A	L	G	H	Q	R	Y	I	D	Y	A	V	R	H	S	H	K
Template Known Secondary structure								T	T	S										.	.	.	.	.	.	.	.	.				T	T							T	T							S	S	S	S		T	T	S	S		T	T	T																				S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.										.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.											.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	L	E	D	E	S	R	M	I	G	S	N	H	L	P	.	.	.	.	.	.	.	.	.	.	E	C	L	R	E	R	M	T	Q	A	A	I	A	V	V	E	D	P	F	E	I	R	L	E	R	L	N	E	E	Y	F	L	R	M	H	H	D	F	T	H	A	Y	G	D	E	Q	G	W	Q	E	Y	C	E	Y
Query Conservation																		.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation																																																																											.
Template Sequence		I	A	F	I	D	T	D	F	I	T	T	Q	A	F	C	I	Q	Y	E	G	K	A	H	P	F	L	D	S	X	I	K	E	Y	P	F	D	V	T	I	L	L	K	N	N	T	E	Q	K	Q	R	Q	Q	F	Q	Q	L	L	K	K	L	L	D	K	Y	K	V	P	Y	I	E	I	E	S	.	P	S	Y	L	D	R
Template Known Secondary structure						S	S														S													S			S													S														G	G	G									.	S	S
Template Predicted Secondary structure																																																																											.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	H	G	L	S	A	I	K	R	R	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	N	Q	V	K	A	V	I	E	K	V	L	N
Template Known Secondary structure													T	S
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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