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Job DescriptionP77425
Confidence99.76%DateThu Jan 5 12:29:04 GMT 2012
Rank54Aligned Residues225
% Identity15%Templated1vgya1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  ETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVN. . .
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Template Sequence  QSLELAKELISRPS. . . . . . . VTPDDRDCQKLXAERLHKIGFAAEEXHFGNTKNIWLRRGTKAPVVCFAGHTDVVPTGPV
Template Known Secondary structure  TS

.......BTT

TTTTT


BTTB

SSSS

B




G
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   5....10........ .20.........30.........40.........50.........60.........70.......
 
   88.90.........100.........110.........120.........130.........140........
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Query Sequence  . . . . . . . . . . . . . . . . . . . GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPD
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Template Sequence  EKWDSPPFEPAERDGRLYGRGAADXKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELI
Template Known Secondary structure  GGSSS
TTS
TTSTTTTTT
TT
SSS
SSS

TTSTT

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   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   149150.........160.........170.........180.........190.........200.........210.........220........
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Query Sequence  DVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAG
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Template Sequence  DYCIVGEPTAVDK. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LGDXIKNGRRPFLTQAGKLTDVA
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BSSS............................................TTS




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   158.160.........170 .........180.........190...
 
   229230. ........240.........250... ......260.........270.........280.......
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Query Sequence  TTP. . MGYRRDTVYAFSRICHQSVEKA. . . . . KRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDC
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Template Sequence  RAAIAETCGIEAELSTTGGTSDGRFIKAXAQELIELGPSNATIHQIN. ENVRLNDIPKLSAVYEGI
Template Known Secondary structure  SS



S


TGGG

SB
TTTTSTT.
TT
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   307..310.........320.........330.........340.........350... ......360.........370.
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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