Job Description P77425 Confidence 100.00% Date Thu Jan 5 12:29:04 GMT 2012 Rank 5 Aligned Residues 348 % Identity 17% Template c3ramC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:hmra protein; PDBTitle: crystal structure of hmra Resolution 2.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		I	T	H	F	R	Q	A	I	E	E	T	L	P	W	L	S	S	F	G	A	D	P	A	G	G	M	T	R	L	L	Y	S	P	E	W	L	E	T	Q	Q	Q	F	K	K	R	M	A	A	S	G	L	E	T	R	F	D	E	V	G	.	.	.	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V	L	S
Query Conservation																																																													.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																.	.	.													.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																															.
Template Sequence		I	E	T	N	K	Y	S	Y	I	E	I	S	H	R	I	H	E	R	.	.	.	.	.	.	.	.	.	.	P	E	L	G	N	E	E	I	F	A	S	R	T	L	I	D	R	L	K	E	H	D	F	E	I	E	T	E	I	A	G	H	A	T	G	F	I	A	T	Y	D	S	G	L	D	G	.	P	A	I	G	F
Template Known Secondary structure					T														S	.	.	.	.	.	.	.	.	.	.			B	T	T															T	T	T								T	T												S	S	S	S	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																															.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.											.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		G	S	H	I	D	T	V	V	N	G	G	N	L	D	G	Q	F	G	.	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	M	A	E	E	E	G	S	R	F	P	Y	V	F	W	G	S	K	N	I	F	G	L	A	N	P	D	D	V	R	N	I	C	D	A	K
Query Conservation																				.
Alig confidence																				.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	E	Y	D	A	L	P	G	L	G	H	A	C	G	H	N	I	I	G	T	A	S	V	L	G	A	I	G	L	K	Q	V	I	D	Q	I	G	G	K	V	V	V	L	G	C	P	A	E	E	G	G	E	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							B		T	T	T	S	S	S	S																									S										T	T			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	S	F	V	D	A	M	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N	H	A	G	T	T	P	M	G	Y	R	R	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.																																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.																																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	S	A	K	A	S	Y	V	K	A	G	V	I	D	Q	I	D	I	A	L	X	I	H	P	.	.	.	.	.	.	.	.	.	G	N	E	T	Y	K	T	I	D	T	L	A	V	D	V	L	D	V	K	F	Y	G	K	S	A	H	A	S	E	N	A	D	E	A	.	L	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.										T	G	G	G	G		S								.	.	.	.	.	.	.	.	.		S	S	B	B					B													B			B	T	T	T		G	G	G		.	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
													135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.										.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	R	M	G	D	P	L	V	L	T	F	G	K	V	E	P	R	P	N	T	V	N	V	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L	R	D	F	T	Q	Q	L	E	N	D	M	R	A	I	C	D	E	M	D	I	G	I
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		A	L	D	A	X	I	S	Y	F	N	G	V	A	Q	L	R	Q	H	I	K	K	D	Q	R	V	H	G	V	I	L	D	.	G	G	K	A	A	N	I	I	P	D	Y	T	H	A	R	F	Y	T	R	A	X	T	R	K	E	L	D	I	L	T	E	K	V	N	Q	I	A	R	G	A	A	I	Q	T	G	C	D	Y
Template Known Secondary structure																	T	T	S	S		T	T										.			S		T	T	B			S											S	S																							T
Template Predicted Secondary structure																																	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		318	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.	.	.	.	.							.	.
Predicted Secondary structure									.																										.																										.	.												.	.	.	.	.	.
Query SS confidence									.																										.																										.	.												.	.	.	.	.	.
Query Sequence		D	I	D	L	W	M	D	.	E	E	P	V	P	M	N	K	E	L	V	A	T	L	T	E	L	C	E	R	E	K	L	N	Y	.	R	V	M	H	S	G	A	G	H	D	A	Q	I	F	A	P	R	V	P	T	C	M	I	F	I	.	.	P	S	I	N	G	I	S	H	N	P	A	.	.	.	.	.	.	E	R
Query Conservation									.																										.																										.	.												.	.	.	.	.	.
Alig confidence									.																										.																										.	.												.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	G	P	I	Q	N	G	V	N	E	F	I	K	T	P	K	L	D	D	L	F	A	K	Y	A	E	E	V	G	E	A	V	I	D	D	D	F	G	Y	G	S	T	D	T	G	N	V	S	H	V	V	P	T	I	H	P	H	I	K	I	G	S	R	N	L	V	G	H	T	H	R	F	R	E	A	A	A	S	V
Template Known Secondary structure						S	S			B																				T	T			B			S					B			T					T	T	T	S		B								S		T	T			T	T	S								T	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	I	T	D	L	A	E	G	V	K	T	L	A	L	M	L	Y	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	G	D	E	A	L	I	K	G	A	K	I	X	A	L	X	G	L	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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