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Job DescriptionP77425
Confidence100.00%DateThu Jan 5 12:29:04 GMT 2012
Rank7Aligned Residues341
% Identity16%Templatec3pfoB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative acetylornithine deacetylase; PDBTitle: crystal structure of a putative acetylornithine deacetylase (rpa2325)2 from rhodopseudomonas palustris cga009 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60
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Query Sequence  ITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVG. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  VDRNFNDQVAFLQRXVQF. . . . . . . . . . RSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPXDTIDPAGS
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   20.........30....... ..40.........50.........60.........70.........80.........
 
   61........70.........80....... ..90.........100.........110.......
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Query Sequence  . NLYGRLNGTEYPQEVVLSGSHIDTVVN. . . . . . . . . . . . . . . . . . . . . . GGNLDGQFGALAAWLAIDWLKTQYGAPLRT
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Template Sequence  XQVVATADSDGKG. RSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWXIGRGAQDXKGGVSAXIFALDAIRTAGYAPDAR
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   90.........100.. .......110.........120.........130.........140.........150.........160........
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  VEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVL
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Template Sequence  VHVQTVTEEESTG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NGALSTLXRGYRADACL
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   169170.........180. ........190........
 
   198.200.........210.........220.........230.........240.........250.. .......260....
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Query Sequence  ESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEK. . . . . . . . . . . . . AKRMGDPLVLTF
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Template Sequence  IPEPTGHTLTRAQVGAVWFRLRVRGTPVH. . VAYSETGTSAILSAXHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNV
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B..GGGGGGS

GGGSTTTTTSSS


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   199200.........210.........220....... ..230.........240.........250.........260.........270......
 
   265....270.........280.........290.........300.........310 .........320........ .330.......
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Query Sequence  GKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAIC. . . . . . DEMDIGIDIDLWMDEEPV. PMNKELVAT
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Template Sequence  GIIK. GGDWASSTAAWCELDCRLGLLTGDTPQEAXRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDV
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TTB



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   277..280 .........290.........300.........310.........320.........330.........340.........350.....
 
   338.340..... ....350.........360...... ...370.........380.........390.........400.......
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Query Sequence  LTELCERE. KLNYRVMHSGAGHDAQIFAPR. VPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQL
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Template Sequence  LTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYGQG. PHAFDERIDLESLRKTTLSIALFVAEW
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   356...360.........370.........380.........390......... 400.........410.........420......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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