Return to main results Retrieve Phyre Job Id

Job DescriptionP77425
Confidence100.00%DateThu Jan 5 12:29:04 GMT 2012
Rank18Aligned Residues358
% Identity16%Templatec3mruB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:aminoacyl-histidine dipeptidase; PDBTitle: crystal structure of aminoacylhistidine dipeptidase from vibrio2 alginolyticus
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70 .........80.......
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Query Sequence  EETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTE. . YPQEVVLSGSHIDTVVN
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Template Sequence  APLWQFFDKICSIPH. . . . . . . PSKHEEALAQYIVTWATEQGFDVRRDPTGNVFIKKPATPGMENKKGVVLQAHIDMVPQ
Template Known Secondary structure  TTS

.......BTT

TTTT


TTS



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SB



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   14.....20........ .30.........40.........50.........60.........70.........80......
 
   88.90..... ....100.........110.........120.........130.........140...
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Query Sequence  GGNLDGQF. . . . . . . . . . . . . . . . . . . . . . . . GALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFG
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Template Sequence  KNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLASKEIKHGPIEVLLTIDEEAGM. . . . . TGAFGLEA
Template Known Secondary structure  B
SS



TTTS


TTSSB


T
SS


S
S
SSSTT.....S

T
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   87..90.........100.........110.........120.........130.........140.........150... ......160.
 
   144.....150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  LANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNG.
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Template Sequence  GWLKGDILLNTDSEQEGE. . . . . . . . . . . . . . . . . . . . . . . . . . VYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGL
Template Known Secondary structure  TS


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   162.......170......... 180.........190.........200.........210.....
 
   223......230.........240.........250.........260...
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Query Sequence  ESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KGGHSGCDIHTGRGNANKLIGRFLAGHAQELDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTEL
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BTTTGGGS



T

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GGG
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   216...220.........230.........240.........250.........260.........270.........280.........290.....
 
   264.....270.........280.........290....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FGKVEPRPNTVNVVPGKTTFTIDCRHTDAAV
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Template Sequence  GKIETDIVTFNEEVATDAQVFAIADQQRFIAALNACPNGVMRMSDEVEGVVETSLNVGVITTEENKVTVLCLIRSLIDSG
Template Known Secondary structure  TTT






S

S

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SSSTT
TTSS
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   296...300.........310.........320.........330.........340.........350.........360.........370.....
 
   295....300.........310.........320.........330.........340..... ....350.........360...... ...370.
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Query Sequence  LRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCERE. KLNYRVMHSGAGHDAQIFAPR. . VPTCM
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Template Sequence  RSQVEGMLQSVAE. . . . LAGAQIEFSGAYPGWKPDADSEIMAIFRDMYEGIYGHKPNIMVIHAGLECGLFKEPYPNMDMV
Template Known Secondary structure  ....TT


B


SS
TTTTTT

S

SS

GGGGGGSSSS

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   376...380........ .390.........400.........410.........420.........430.........440.........450.
 
   372.......380.........390.........400.........410
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Query Sequence  IFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQ
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Template Sequence  SFGPTIKF. PHSPDEKVKIDTVQLFWDQMVALLEAIPEK
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S.TTSTT
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   452....... 460.........470.........480.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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