Job Description P77425 Confidence 99.28% Date Thu Jan 5 12:29:04 GMT 2012 Rank 67 Aligned Residues 353 % Identity 13% Template c3l6sA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:aspartyl aminopeptidase; PDBTitle: crystal structure of human aspartyl aminopeptidase (dnpep),2 in complex with aspartic acid hydroxamate Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.																	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	R	Q	A	I	E	E	T	L	P	W	L	S	S	F	G	A	D	P	A	G	G	M	T	R	L	L	Y	S	P	E	W	L	E	T	Q	Q	Q	F	K	K	R	M	A	A	S	G	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	F	D	E	V	G	N	L	Y	G	R	L	N	G
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	E	A	V	Q	T	A	A	K	E	L	L	K	F	V	N	R	.	.	.	.	.	.	.	.	.	.	S	P	S	P	F	H	A	V	A	E	C	R	N	R	L	L	Q	A	G	F	S	E	L	K	E	T	E	K	W	N	I	K	P	E	S	K	Y	F	M	T	R	N	S	S	T	I	I	A	F	A	V	G
Template Known Secondary structure																			T	.	.	.	.	.	.	.	.	.	.		S	S															T	T						T	T	S						T	T								T	T	T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.											.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		69	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		T	E	Y	P	.	.	Q	E	V	V	L	S	G	S	H	I	D	T	V	V	N	G	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	M	A	E	E	E	G	S	R	F	P	Y	V	F	W	G	S	K	N	I	F	G	L	A	N
Query Conservation						.	.
Alig confidence						.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	Y	V	P	G	N	G	F	S	L	I	G	A	H	T	D	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	L	R	V	K	R	R	S	R	R	S	Q	V	G	F	Q	Q	V	G	V	E	T	Y	G	G	G	I	W
Template Known Secondary structure		T	T			T	T														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T										S	S			G
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																																		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	D	V	R	N	I	C	D	A	K	G	N	S	F	V	D	A	M	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	W	F	D	R	D	L	T	L	A	G	R	V	I	V	K	C	P	T	S	G	R	L	E	Q	Q	L	V	H	V	E	R	P	I	L	R	I	P	H	L	A	I	H	L	Q	R	N	I	N	E	N	F	G	P	N	T	E	M	H	L	V	P	I	L	A	T	A	I	Q	E	E	L	E	K	G	T	E	R	H
Template Known Secondary structure		G	G	G	T	T														T	T	T												S			B	B						G	G	G	S	T	T	T	T	T						T	T	T	T															T					S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
															206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.									.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N	H	A	G	T	T	P	M	G	Y	R	R	D	T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	.	.	.	.	.	.	.	.	R	M	G	D	P	L	V	L	T	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	S	V	L	M	S	L	L	C	A	H	L	G	L	S	P	K	D	I	V	E	M	E	L	C	L	A	D	T	Q	P	A	V	L	G	G	A	Y	D	E	F	I	F	A	P	R	L	D	N	L	H	S	C	F	C	A	L	Q	A	L	I	D	S	C	A	G	P	G	S	L	A	T	E	P	H	V	R	M	V	T
Template Known Secondary structure														T			G	G	G												S						T	T	T	T						T	T																		T		S	T	T	T	T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.																													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	V	E	P	R	P	N	T	V	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L	R	D	F	T	Q	Q	L	E	N	D	M	R	A	I	C	D	E	M	D	I	G
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		L	Y	D	N	E	E	V	G	S	E	S	A	Q	G	A	Q	S	L	L	T	E	L	V	L	R	R	I	S	A	S	C	Q	H	P	T	A	F	E	E	A	I	P	K	S	F	M	I	S	A	D	M	A	H	A	V	H	P	N	Y	L	D	K	H	E	E	.	.	.	.	.	.	N	H	R	P	L	F	H	K	G
Template Known Secondary structure				S		G	G	G	T			S	T	T	S	T	T	S	T													S	S		T	T						G	G	G														T	T	S	G	G	G	S		T	.	.	.	.	.	.	T					T	T	S
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.					.	.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.											.	.	.
Query SS confidence																																							.	.	.	.											.	.	.
Query Sequence		I	D	I	D	L	W	M	D	E	E	P	V	P	M	N	K	E	L	V	A	T	L	T	E	L	C	E	R	E	K	L	N	Y	R	V	M	H	.	.	.	.	S	G	A	G	H	D	A	Q	I	F	.	.	.	A	P	R	V	P	T	C	M	I	F	I	P	S	I	N	G	I	S	H	N	P	A	E	R	T	N
Query Conservation																																							.	.	.	.											.	.	.
Alig confidence						.																																	.	.	.	.											.	.	.															.	.
Template Conservation						.																																																																.	.
Template Sequence		P	V	I	K	.	V	N	S	K	Q	R	Y	A	S	N	A	V	S	E	A	L	I	R	E	V	A	N	K	V	K	V	P	L	Q	D	L	M	V	R	N	D	T	P	C	G	T	T	I	G	P	I	L	A	S	R	L	G	L	R	V	L	D	L	G	S	P	Q	L	.	.	A	M	H	S	I	R	E	M	A	C
Template Known Secondary structure						.			T	T	T	T	S																		T										T	T	S															T												.	.	S	T	T	S	S	S
Template Predicted Secondary structure						.																																																																.	.
Template SS confidence
		381	.	.	.		.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	L	A	E	G	V	K	T	L	A	L	M	L	Y	Q	L	A	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	T	G	V	L	Q	T	L	T	L	F	K	G	F	F	E	L	F	P	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.