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Job DescriptionP77425
Confidence100.00%DateThu Jan 5 12:29:04 GMT 2012
Rank6Aligned Residues341
% Identity20%Templatec3gb0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:peptidase t; PDBTitle: crystal structure of aminopeptidase pept (np_980509.1) from bacillus2 cereus atcc 10987 at 2.04 a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50....... ..60.........70......
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Query Sequence  FRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD. . . . . . . . EVGNLYGRLNGTEYPQEVV
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Template Sequence  NQERLVNEFXELVQV. . . . . . . . . . DSETKFEAEICKVLTKKFTDLGVEVFEDDTXAVTGHGAGNLICTLPATKDGVDTI
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TS..........

BTT

TT

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   3......10....... ..20.........30.........40.........50.........60.........70..
 
   77..80.........90. ........100.........110.........120.........130.......
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Query Sequence  LSGSHIDTVVNGGNL. . . . . . . . . . . . . . . . . . . DGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWG
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Template Sequence  YFTSHXDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASXFEAIRVLKEKNI. PHGTIEFIITVGEESGLVGAKAL.
Template Known Secondary structure 

B
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TT
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GGGTSS.
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   73......80.........90.........100.........110.........120....... ..130.........140.........150
 
   138.140.........150.........160.........170.........180.........190.........200.........210.......
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Query Sequence  SKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYT
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRERITAKYGYALDSDGKVGEIVVAAPTQAKVN
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GGG


S
S
TT
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   151........160.........170.........180...
 
   218.220.........230.........240.........250.........260.........270.........280.........290.......
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Query Sequence  VTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRD
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Template Sequence  AIIRGKTAHAGVAPEKG. VSAITIAAKAIAKXPL. . GRIDSETTANIGRFE. GGTQTNIVCDHVQIFAEARSLINEKXEA
Template Known Secondary structure 
B

BTTT
GGGS.B
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   184.....190.........200 .........210...... ...220.........230. ........240.........250.........
 
   298.300.........310.........320........ .330.........340.........350.........360.........370.....
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Query Sequence  FTQQLENDMRAICDEMDIGIDIDLWMDEEPV. . PMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIP
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Template Sequence  QVAKXKEAFETTAKEXGGHADVEVNVXYPGFKFADGDHVVEVAKRAAEKIGRTPSLHQSGGGSDANVIAGHGIPTVNLAV
Template Known Secondary structure  TT




TT
TT



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TT


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   260.........270.........280.........290.........300.........310.........320.........330.........
 
   376...380.........390.........400.........
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Query Sequence  SINGISHNPAERTNITDLAEGVKTLALMLYQLAW
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Template Sequence  G. YEEIHTTNEKIPVEELAKTAELVVAIIEEVAK
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BSTTSTT

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   340 .........350.........360.........370..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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