Job Description P77425 Confidence 100.00% Date Thu Jan 5 12:29:04 GMT 2012 Rank 3 Aligned Residues 404 % Identity 27% Template c2v8gD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-alanine synthase; PDBTitle: crystal structure of beta-alanine synthase from2 saccharomyces kluyveri in complex with the product beta-3 alanine Resolution 2.5 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.									.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.
Query Sequence		F	R	Q	A	I	E	E	T	L	P	W	L	S	S	.	.	.	.	.	.	.	.	F	G	A	D	P	A	G	G	M	T	R	L	L	Y	S	P	E	W	L	E	T	Q	Q	Q	F	K	K	R	M	A	A	S	G	L	E	T	R	F	D	E	V	G	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V
Query Conservation																.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.																																																							.
Template Conservation																																																																														.
Template Sequence		A	S	G	R	L	N	Q	T	I	L	E	T	G	S	Q	F	G	G	V	A	R	W	G	Q	E	S	H	E	F	G	M	R	R	L	A	G	T	A	L	D	G	A	M	R	D	W	F	T	N	E	C	E	S	L	G	C	K	V	K	V	D	K	I	G	N	M	F	A	V	Y	P	G	K	N	G	G	.	K	P	T
Template Known Secondary structure			T	T													T	T						S	S	S	T	T								T	T	S																T	T	T						B	T	T	S									T	T		S	.	S
Template Predicted Secondary structure																																																																														.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		L	S	G	S	H	I	D	T	V	V	N	G	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	M	A	E	E	E	G	S	R	F	P	Y	V	F	W	G	S	K	N	I	F	G	L	A	N	P	D	D	V	R	N	I	C	D	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		A	T	G	S	H	L	D	T	Q	P	E	A	G	K	Y	D	G	I	L	G	V	L	A	G	L	E	V	L	R	T	F	K	D	N	N	Y	V	P	N	Y	D	V	C	V	V	V	W	F	N	E	E	G	A	R	F	A	R	S	C	T	G	S	S	V	W	S	H	D	L	S	L	E	E	A	Y	G	L	M	S	V
Template Known Secondary structure											S	S	B		S	S	T	T																	T	T				S	S								S			S		S	S	S	S		T	T							T	T	S	S							T		B		S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
				156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	K	G	N	S	F	V	D	A	M	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N	H	A	G	T	T	P	M	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	E	D	K	P	E	S	V	Y	D	S	L	K	N	I	G	Y	I	G	D	T	P	A	S	Y	K	E	N	E	I	D	A	H	F	E	L	H	I	E	Q	G	P	I	L	E	D	E	N	K	A	I	G	I	V	T	G	V	Q	A	Y	N	W	Q	K	V	T	V	H	G	V	G	A	H	A	G	T	T	P	W	R
Template Known Secondary structure		S		S	S			B								T	T				S	B		S	S	T	T	T	S			S										S	S					T	T		S																								T	T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		Y	R	R	D	T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	R	M	G	D	P	L	V	L	T	F	G	K	V	E	P	R	P	N	T	V	N	V	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L	R	D	F	T	Q	Q	L	E	N	D	M	R	A	I	C	D	E	.
Query Conservation																																																																																	.
Alig confidence																									.	.																																																							.
Template Conservation																									.	.
Template Sequence		L	R	K	D	A	L	L	M	S	S	K	M	I	V	A	A	S	E	I	A	Q	R	H	.	.	N	G	L	F	T	C	G	I	I	D	A	K	P	Y	S	V	N	I	I	P	G	E	V	S	F	T	L	D	F	R	H	P	S	D	D	V	L	A	T	M	L	K	E	A	A	A	E	F	D	R	L	I	K	I	N
Template Known Secondary structure		G																						T	.	.	T												S			T	T				S											S	S																			T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.			.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
				313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.			.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.																																		.	.
Query SS confidence		.	.																																		.	.
Query Sequence		.	.	M	D	I	G	I	D	I	D	L	W	M	D	E	E	P	V	P	M	N	K	E	L	V	A	T	L	T	E	L	C	E	R	E	.	.	K	L	N	Y	R	V	M	H	S	G	A	G	H	D	A	Q	I	F	A	P	R	V	P	T	C	M	I	F	I	P	S	I	N	G	I	S	H	N	P	A	E	R	T
Query Conservation		.	.																																		.	.
Alig confidence		.	.																																		.	.
Template Conservation
Template Sequence		D	G	G	A	L	S	Y	E	S	E	T	L	Q	V	S	P	A	V	N	F	H	E	V	C	I	E	C	V	S	R	S	A	F	A	Q	F	K	K	D	Q	V	R	Q	I	W	S	G	A	G	H	D	S	C	Q	T	A	P	H	V	P	T	S	M	I	F	I	P	S	K	D	G	L	S	H	N	Y	Y	E	Y	S
Template Known Secondary structure		T	T																																		S		G	G	G							S	S			T					T	T	T	S										G	G	G			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	T	D	L	A	E	G	V	K	T	L	A	L	M	L	Y	Q	L	A	W	Q	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	E	E	I	E	N	G	F	K	V	L	L	Q	A	I	I	N	Y	D	N	Y	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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