Job Description P77425 Confidence 99.97% Date Thu Jan 5 12:29:04 GMT 2012 Rank 38 Aligned Residues 302 % Identity 19% Template c2pe3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:354aa long hypothetical operon protein frv; PDBTitle: crystal structure of frv operon protein frvx (ph1821)from pyrococcus2 horikoshii ot3 Resolution 2.00 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.																																																							.	.	.
Query SS confidence																								.																																																							.	.	.
Query Sequence		L	P	W	L	S	S	F	G	A	D	P	A	G	G	M	T	R	L	L	Y	S	P	.	E	W	L	E	T	Q	Q	Q	F	K	K	R	M	A	A	S	G	L	E	T	R	F	D	E	V	G	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V	L	S	G	S	H	I	D	T	V	V	N	G	.	.	.
Query Conservation																								.																																																							.	.	.
Alig confidence														.	.	.	.	.	.	.				.																																	.	.	.																				.	.	.
Template Conservation														.	.	.	.	.	.	.																																					.	.	.
Template Sequence		W	K	L	M	Q	E	I	I	E	A	P	G	.	.	.	.	.	.	.	V	S	G	Y	E	H	L	G	I	R	D	I	V	V	D	V	L	K	E	V	A	D	E	V	K	V	D	K	L	G	N	V	I	A	H	F	.	.	.	K	G	S	S	P	R	I	M	V	A	A	H	M	D	K	I	G	V	M	V	N	H
Template Known Secondary structure											S			.	.	.	.	.	.	.	B	T	T		G	G	G	T											T	T		S						T	T								.	.	.			S	S	S										B
Template Predicted Secondary structure														.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
														89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	Y	G	A	P	L	R	T	V	E	V	V	A	M	A	E	E	E	G	S	R	F	P	Y	V	F	W	G	S	K	N	I	F	G	L	A	N	P	D	D	V	R	N	I	C	D	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	K	D	G	Y	L	H	I	V	P	I	G	G	V	L	P	E	T	L	V	A	Q	R	I	R	F	F	T	.	.	.	.	E	K	G	E	R	Y	G	V	V	G	V	L	P	D	W	D	Q	I	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S								S	S			G	G	G	G	T	T								.	.	.	.	T	T														T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	N	S	F	V	D	A	M	K	A	C	G	F	T	L	P	N	A	P	L	T	P	R	Q	D	I	K	A	F	V	E	L	H	I	E	Q	G	C	V	L	E	S	N	G	Q	S	I	G	V	V	N	A	I	V	G	Q	R	R	Y	T	V	T	L	N	G	E	S	N	H	A	G	T	T	P	M	G	Y	R	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	G	A	S	S	K	E	E	A	E	E	M	G	F	R	V	G	T	V	G	E	F	A	P	N	F	T	R	L	N	E	H	R	F	.	.	A	T	P	Y	L	D	D	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S							T	T			T	T													S	S	S			.	.			T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template SS confidence
																																					145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	T	V	Y	A	F	S	R	I	C	H	Q	S	V	E	K	A	K	R	M	G	D	P	L	V	L	T	.	.	F	G	K	V	E	P	R	P	N	T	V	N	V	V	P	G	K	T	T	F	T	I	D	C	R	H	T	D	A	A	V	L	R	D	F	T	Q	Q	L	E	N	D	M	R	A	I	C	D	E	M	D
Query Conservation																													.	.
Alig confidence																													.	.																																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	C	L	Y	A	M	I	E	A	A	R	Q	L	G	D	H	E	A	D	I	Y	I	V	G	S	V	Q	E	E	V	G	L	R	G	A	R	V	A	S	Y	A	I	N	P	E	V	G	I	A	M	D	V	T	F	A	K	Q	P	H	D	K	G	K	I	V	P	E	L	G	K	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T					S	S								S	S		T	T	T	S													S													T	T		T	T						T	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.				.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.										.	.	.
Query SS confidence																																										.	.										.	.	.
Query Sequence		I	G	I	D	I	D	L	W	M	D	E	E	P	V	P	M	N	K	E	L	V	A	T	L	T	E	L	C	E	R	E	K	L	N	Y	R	V	M	H	S	.	.	G	A	G	H	D	A	Q	I	F	.	.	.	A	P	R	V	P	T	C	M	I	F	I	P	S	I	N	G	I	S	H	N	P	A	E	R	T	N
Query Conservation																																										.	.										.	.	.
Alig confidence		.	.	.	.	.	.																																			.	.										.	.	.															.	.
Template Conservation		.	.	.	.	.	.																																																															.	.
Template Sequence		.	.	.	.	.	.	G	P	V	M	D	V	G	P	N	I	N	P	K	L	R	A	F	A	D	E	V	A	K	K	Y	E	I	P	L	Q	V	E	P	S	P	R	P	T	G	T	D	A	N	V	M	Q	I	N	R	E	G	V	A	T	A	V	L	S	I	P	I	R	.	.	Y	M	H	S	Q	V	E	L	A	D
Template Known Secondary structure		.	.	.	.	.	.							S	T	T	S																T										S			S	S	T						T	S	T	T												B	.	.	S	T	T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																																															.	.
Template SS confidence
								258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.			320	.	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	D	L	A	E	G	V	K	T	L	A	L	M	L	Y	Q	L	A	W	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	D	V	D	N	T	I	K	L	A	K	A	L	L	E	E	L	K	P	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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