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Job DescriptionP77425
Confidence99.88%DateThu Jan 5 12:29:04 GMT 2012
Rank49Aligned Residues303
% Identity16%Templatec2greC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:deblocking aminopeptidase; PDBTitle: crystal structure of deblocking aminopeptidase from bacillus cereus
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  HFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHID
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Template Sequence  HHTKETXELIKELVSI. . . . . . . . . . PSPSGNTAKIINFIENYVSEWNVETKRNNKGALILTVKGKNDA. QHRLLTAHVD
Template Known Secondary structure 
TS..........

BTT

TSSSSS
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   3......10........ .20.........30.........40.........50.........60. ........70.
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  TVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVD
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Template Sequence  TLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AXVKEIKPDGRLSLSXIGGFRWN
Template Known Secondary structure  B
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TTS
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GG
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   72.. .....80.........90.......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  AMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFS
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Template Sequence  SVEGEYCEIETSSGKTYTGTILXIEVRIDERVFSADEVRELGIEVGDFVSFDPRVQITESGYIKSRHLDDK. . VSVAILL
Template Known Secondary structure  GGTT

TTS


SS


STT

TT





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   98.100.........110.........120.........130.........140.........150.........160........ .170.....
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  RICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWM
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Template Sequence  KLIKRLQDENVTLPYTTHFLISNNENIPEETVEY. . . . . LAVDXGALGDG. . . . . . . . . . . . . . . . . . SDEYTVSICAKD
Template Known Secondary structure  T


SS




TT.....




S

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   196...200.........210.........220......... 230.........240 .........250..
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  DEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALM
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Template Sequence  SSGPY. . HYALRKHLVELAKTNHIEYKVDIYPYYRA. . . . GFDVKHALIGAGID. . SSHAF. ERTHESSIAHTEALVYAY
Template Known Secondary structure  TT
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TT

TT


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   263.... ..270.........280.........290...... ...300.........310 ..... ....320.........330...
 
   404.
Predicted Secondary structure 
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Query Sequence  LY
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Template Sequence  VX
Template Known Secondary structure  T
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   342.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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