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Job DescriptionP77425
Confidence100.00%DateThu Jan 5 12:29:04 GMT 2012
Rank36Aligned Residues294
% Identity13%Templatec1vhoA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:endoglucanase; PDBTitle: crystal structure of a putative peptidase/endoglucanase
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80.......
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Query Sequence  IEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVN.
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Template Sequence  TGKLLXELSNL. . . . . . . . . . DGPSGYETNVVSYIKSVIEPFVDEAKTTRHGSLIGYKKGKGI. . GKLAFFAHVDEIGFV
Template Known Secondary structure  S..........

BTT

GGG
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B

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   5....10..... ....20.........30.........40.........50....... ..60.........70..
 
   88.90.........100.........110.........120.........130.........140......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . GGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLAN
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Template Sequence  VSKVEGQFARLEPVYASKVRIYTKNGIERGVIGXLAPHLQDSESRKKVPTYDEI. . . . . . . . . . . . . . . . . . . . . . . . . .
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TTTT


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   73......80.........90.........100.........110.........120......
 
   147..150.........160.........170.........180.........190.........200.........210.........220......
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Query Sequence  PDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNH
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FVDLSLCERGVRVGDIAVIDQTAFETNGKVV
Template Known Secondary structure  .................................................GGGSSS


TT




TT
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   135....140.........150.........160.....
 
   227..230.........240.........250.........260.........270.........280.........290.........300......
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Query Sequence  AGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDM
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Template Sequence  GKALDNRASCGVLVKVLEFLKRYDHPWDVYVVFSVQEETGCLGALTGAYEINPDAAIVXDVTFASEPPFS. . . . . . . . . .
Template Known Secondary structure  TTTT


SS
TTSSSTT




S



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   166...170.........180.........190.........200.........210.........220.........230.....
 
   307..310.........320.........330.........340.........350.........360.........370.........380......
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Query Sequence  RAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAE
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Template Sequence  . . . . . . . DHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQEEAVGGRTDFVQLVRNGVRTSLISIP. LKYXHTPVE
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TTS


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   236...240.........250.........260.........270.........280.........290........ .300.......
 
   387..390.........400.......
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Query Sequence  RTNITDLAEGVKTLALMLYQL
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Template Sequence  XVDPRDVEELARLLSLVAVEL
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   312.......320.........330..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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