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Job DescriptionP77425
Confidence100.00%DateThu Jan 5 12:29:04 GMT 2012
Rank30Aligned Residues333
% Identity17%Templatec1vheA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:aminopeptidase/glucanase homolog; PDBTitle: crystal structure of a aminopeptidase/glucanase homolog
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  AIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVV.
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Template Sequence  KLDETLTXLKDLTDAKG. . . . . . . IPGNEREVRQVXKSYIEPFADEVTTDRLGSLIAKKTGAENG. PKIXIAGHLDEVGF
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S

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TT

GGG
S
TT

SSTTS.




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   3......10......... 20.........30.........40.........50.........60 .........70....
 
   87..90.........100.........110.........120.........130.........140.........150..
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Query Sequence  . . . . . . . . . . . . . . NGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRN
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Template Sequence  XVTQITDKGFIRFQTVGGWWAQVXLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDXFI. . . . . . . . . . . . . .
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TTS
S


GGGTTT
TT


GGGS
TTTTTS


GGG
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   75....80.........90.........100.........110.........120.........130.........140
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  ICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPM
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DIGASSREEALEWGVLPGDXIVPHFEFTVXNNEKFLLAKA.
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S
SSTT

TT





SSTTTT.
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   141........150.........160.........170.........180
 
   233......240.........250.........260.........270.........280.........290.........300.........310..
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Query Sequence  GYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDE
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Template Sequence  . . . WDNRIGCAIAIDVLRNLQNTDHPNIVYGVGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKXG
Template Known Secondary structure  ...TS

SSS

TTTS

S


STT

TTT



TT
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   181........190.........200.........210.........220.........230.........240.........250.......
 
   313......320.........330.........340.........350.. .......360...... ...370.........380........
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Query Sequence  MDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVM. HSGAGHDAQIFAPR. . . VPTCMIFIPSINGISHNPAERT
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Template Sequence  KGPQIIVYD. . . . ASXVSHKGLRDAVVATAEEAGIPYQFDAIAGGGTDSGAIHLTANGVPALSITIATR. . YIHTHAAXL
Template Known Secondary structure  S

....TT

T


TT


TTTSTT


B..STTSS
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   258.260...... ...270.........280.........290.........300.........310.........320.. .......330.
 
   389390.........400.........410.
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Query Sequence  NITDLAEGVKTLALMLYQLAWQK
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Template Sequence  HRDDYENAVKLITEVIKKLDRKT
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   332.......340.........350....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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