Job Description P77425 Confidence 97.87% Date Thu Jan 5 12:29:04 GMT 2012 Rank 83 Aligned Residues 87 % Identity 14% Template c1cx8F_ PDB info PDB header:metal transport Chain: F: PDB Molecule:transferrin receptor protein; PDBTitle: crytal structure of the ectodomain of human transferrin receptor Resolution 3.20 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110					.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.
Query SS confidence																																																												.	.	.	.
Query Sequence		E	T	R	F	D	E	V	G	N	L	Y	G	R	L	N	G	T	E	Y	P	Q	E	V	V	L	S	G	S	H	I	D	T	V	V	N	G	G	N	L	D	G	Q	F	G	A	L	A	A	W	L	A	I	D	W	L	K	T	Q	.	.	.	.	Y	G	A	P	L	R	T	V	E	V	V	A	M	A	E	E	E	G
Query Conservation																																																												.	.	.	.
Alig confidence																																			.																									.	.	.	.
Template Conservation																																			.
Template Sequence		V	L	K	E	I	K	I	L	N	I	F	G	V	I	K	G	F	V	E	P	D	H	Y	V	V	V	G	A	Q	R	D	A	W	.	G	P	G	A	A	K	S	G	V	G	T	A	L	L	L	K	L	A	Q	M	F	S	D	M	V	L	K	D	G	F	Q	P	S	R	S	I	I	F	A	S	W	S	A	G	D	F
Template Known Secondary structure																		S	S															S	.	S			T	T	T	T																				T	S					S							B			S	G	G	G
Template Predicted Secondary structure																																			.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.		.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	F	P	Y	V	F	W	G	S	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	V	G	A	T	E	W	L	E	G	Y
Template Known Secondary structure		T	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		459	460	.	.	.	.	.	.	.	.	.	470

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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