Return to main results Retrieve Phyre Job Id

Job DescriptionP77510
Confidence99.80%DateThu Jan 5 12:30:10 GMT 2012
Rank20Aligned Residues115
% Identity19%Templated2hkja3
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA gyrase/MutL, N-terminal domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   428.430.........440.........450.... .....460...... ...470.........480.........490......... 500.
Predicted Secondary structure 





.

.














....

Query SS confidence 


























.











.
































. . . .

Query Sequence  LDSTEFAAIVGNLLDNAFEASLRSDEG. NKIVELFLSDEG. DDVVIEVADQGCGVPESLRDKIFEQGVSTRADE. . . . PG
Query Conservation   
   
 


 


 



        .   
 
      .  
 
 
 
 
 

  
 
  


 
  
    ....  
Alig confidence 


























.











.
































....

Template Conservation       
 


 


 




         
 
 
           
 
 


 

  
 
  

       
       
Template Sequence  NPARALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKYVNRQTRG
Template Known Secondary structure  STTGGGT


TTTT
S



GGG


SS




S

S
Template Predicted Secondary structure 




























Template SS confidence 















































































   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   502.......510........ .520......... 530.........540..
Predicted Secondary structure 




.



...





Query SS confidence 
















.










. . .












Query Sequence  EHGIGLYLIASYVTRCG. GVITLEDNDPC. . . GTLFSIYIPKVKP
Query Conservation 





 

  

    .
 
 
 
  
 ...

 
 
 

    
Alig confidence 
















.










...












Template Conservation    



      
       
 
 
                    
Template Sequence  MYGLGVKAAVLYSQMHQDKPIEIETSPVNSKRIYTFKLKIDINKN
Template Known Secondary structure  S
TTT




TT
STTTT
Template Predicted Secondary structure 















Template SS confidence 












































   107..110.........120.........130.........140.........150.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions