Job Description P77510 Confidence 95.98% Date Thu Jan 5 12:30:10 GMT 2012 Rank 73 Aligned Residues 106 % Identity 15% Template c3lyxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:sensory box/ggdef domain protein; PDBTitle: crystal structure of the pas domain of the protein cps_12912 from colwellia psychrerythraea. northeast structural3 genomics consortium target id csr222b Resolution 2.00 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		V	V	R	Q	Q	E	A	L	F	S	S	V	Y	E	G	L	I	A	V	D	P	H	G	Y	I	T	A	I	N	R	N	A	R	K	M	L	G	L	S	S	P	G	R	Q	W	L	G	K	P	I	V	E	V	V	R	P	A	D	F	F	T	E	Q	I	D	E	K	R	Q	D	V	V	A	N	F	N	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																																															.	.	.
Template Conservation
Template Sequence		I	L	K	Q	R	A	K	A	F	D	Y	V	F	D	A	I	V	V	T	D	L	Q	G	F	I	I	D	W	N	K	G	S	E	T	L	Y	G	Y	S	K	E	Q	A	I	G	Q	P	V	N	M	L	H	V	P	G	D	T	E	H	I	T	S	E	V	I	S	A	V	E	N	Q	G	K	W	T	G	E	I	R	M
Template Known Secondary structure									G	G	G	T		S	S							T	T		B																				T	T	S	B	G	G	G	G	S		T	T	T															T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
									297	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.													.
Query SS confidence		.	.	.	.	.	.	.													.
Query Sequence		.	.	.	.	.	.	.	L	S	V	I	A	N	R	E	A	I	R	S	.	G	D	D	L	L	G	A	I	I	S	F	R	S	K	D	E	I
Query Conservation		.	.	.	.	.	.	.													.
Alig confidence		.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		L	H	K	D	G	H	I	G	W	I	E	S	M	C	V	P	I	Y	G	E	N	Y	Q	M	V	G	A	L	G	I	N	R	D	I	T	K	R
Template Known Secondary structure				T	T	S															S	T	T													S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions