Job Description P77510 Confidence 25.28% Date Thu Jan 5 12:30:10 GMT 2012 Rank 149 Aligned Residues 135 % Identity 11% Template c3lifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative diguanylate cyclase (ggdef) with pas/pac domain; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase rphk1s-z16 Resolution 2.70 Å

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		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	S	F	E	D	Y	L	T	L	H	V	R	D	M	A	M	N	Q	A	K	I	I	A	S	N	D	S	V	I	S	A	V	K	T	R	D	Y	K	R	L	A	T	I	A	N	K	L	Q	R	D	T	D	F	D	Y	V	V	I	G	D	R	H	S	I	R	L	Y	H	P	N	P	E	K	I	G	Y	P	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	R	N	L	S	H	S	L	A	E	H	A	T	H	T	F	Q	G	A	D	V	V	L	D	D	I	V	S	F	X	K	W	R	P	H	P	S	P	V	F	N	E	R	L	R	A	L	A	D	N	L	P	Q	L	S	D	V	A	I	L	D	A	D	G	Q	L	T	Y	A	S	V	K	P	V	P	A	L	D	N	S
Template Known Secondary structure																																	T		S	S			T														T	T									T	T	S	B					S	S	S	S					B		T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		122	.	.	.	.	.	.	.	130				.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure											.	.	.						.	.	.	.
Query SS confidence											.	.	.						.	.	.	.
Query Sequence		F	T	K	Q	G	A	L	E	K	.	.	.	G	E	S	Y	F	.	.	.	.	I	T	G	K	G	S	M	G	M	A	M	R	A	K	T	P	I	F	D	D	D	G	K	V	I	G	V	V	S	I	G	Y	L	V	S	K	I	D	S	W	R
Query Conservation											.	.	.						.	.	.	.
Alig confidence											.	.	.						.	.	.	.
Template Conservation
Template Sequence		D	R	S	Y	F	R	Y	H	R	A	N	D	D	H	T	L	L	I	T	G	P	I	Q	S	R	T	S	G	V	W	V	F	V	V	S	R	R	L	E	T	T	D	G	K	F	F	G	V	V	V	A	T	I	E	S	E	Y	F	S	T	F	Y
Template Known Secondary structure		T	S																							T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions