Job Description P77510 Confidence 76.29% Date Thu Jan 5 12:30:10 GMT 2012 Rank 107 Aligned Residues 115 % Identity 12% Template c3kx0X_ PDB info PDB header:signaling protein Chain: X: PDB Molecule:uncharacterized protein rv1364c/mt1410; PDBTitle: crystal structure of the pas domain of rv1364c Resolution 2.30 Å

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		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.										.	.	.	.	.	280	.
Predicted Secondary structure																														.																																				.	.	.	.	.	.	.	.	.
Query SS confidence																														.																																				.	.	.	.	.	.	.	.	.
Query Sequence		M	E	P	K	Q	I	A	R	V	V	R	Q	Q	E	A	L	F	S	S	V	Y	E	G	L	I	A	V	D	.	P	H	G	Y	I	T	A	I	N	R	N	A	R	K	M	L	G	L	S	S	P	G	R	Q	W	L	G	K	P	I	V	E	V	V	R	.	.	.	.	.	.	.	.	.	P	A	D	F	F	T	E
Query Conservation																														.																																				.	.	.	.	.	.	.	.	.
Alig confidence																														.																			.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		X	D	W	D	K	T	V	G	A	A	E	D	V	R	R	I	F	E	H	I	P	A	I	L	V	G	L	E	G	P	D	H	R	F	V	A	V	N	A	A	Y	R	G	F	S	P	L	.	.	.	.	L	D	T	V	G	Q	P	A	R	E	V	Y	P	E	L	E	G	Q	Q	I	Y	E	X	L	D	R	V	Y	Q
Template Known Secondary structure								T														S	S							T	T	T	T																.	.	.	.		S		T	T	S	B						T	T	S		S	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		Q	I	D	E	K	R	Q	D	V	V	A	N	F	N	G	L	S	V	I	A	N	R	E	A	I	R	S	G	.	D	D	L	L	G	A	I	I	S	F	R	S	K	D	E	I	S	T	L	N	A
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		T	G	E	P	Q	S	G	S	E	W	R	L	Q	E	E	R	Y	F	D	F	V	V	T	P	R	R	R	A	D	G	S	I	E	G	V	Q	L	I	V	D	D	V	T	S	R	V	R	A	R	Q
Template Known Secondary structure																													T	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions