Job Description P77510 Confidence 61.22% Date Thu Jan 5 12:30:10 GMT 2012 Rank 115 Aligned Residues 142 % Identity 15% Template c3c38A_ PDB info PDB header:signaling protein, transferase Chain: A: PDB Molecule:autoinducer 2 sensor kinase/phosphatase luxq; PDBTitle: crystal structure of the periplasmic domain of vibrio2 cholerae luxq Resolution 2.30 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		F	T	A	S	F	E	D	Y	L	T	L	H	V	R	D	M	A	M	N	Q	A	K	I	I	A	S	N	D	S	V	I	S	A	V	K	T	R	D	Y	K	R	L	A	T	I	A	N	K	L	Q	R	D	T	.	.	.	D	F	D	Y	V	V	I	G	D	R	H	S	I	R	L	Y	H	P	N	P	E	K	I	G
Query Conservation																																																							.	.	.
Alig confidence																																																							.	.	.
Template Conservation
Template Sequence		Q	T	S	S	L	I	Q	S	L	F	D	F	R	L	A	A	L	R	I	H	Q	D	S	T	A	K	N	A	S	L	I	N	A	L	V	S	R	D	S	S	R	L	D	E	F	F	S	S	V	D	E	L	E	L	S	N	A	P	D	L	R	F	I	S	S	H	D	N	I	L	W	D	D	G	N	A	S	F	Y	G
Template Known Secondary structure																										T	T										T	T		T	T	T											T	T	G	G	G			S							T	T							S		G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
					118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.																											.	.
Query SS confidence		.	.	.																											.	.
Query Sequence		.	.	.	Y	P	M	Q	F	T	K	Q	G	A	L	E	K	G	E	S	Y	F	I	T	G	K	G	S	M	G	.	.	M	A	M	R	A	K	T	P	I	F	D	D	D	G	K	V	I	G	V	V	S	I	G	Y	L	V	S	K	I	D	S	W	R	A	E	F	L	L	P
Query Conservation		.	.	.																											.	.
Alig confidence		.	.	.																											.	.
Template Conservation
Template Sequence		I	A	Q	Q	E	L	N	K	L	I	R	R	V	A	I	S	G	N	W	H	L	V	Q	T	P	S	E	G	K	S	V	H	I	L	M	R	R	S	S	L	I	E	A	G	G	Q	V	V	G	Y	L	Y	V	G	I	V	L	N	D	N	F	A	L	L	E	N	I	R	S	G
Template Known Secondary structure														S		S	S	S	S									S	S	S																													T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions