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Job Description | P77510 | Confidence | 99.67% | Date | Thu Jan 5 12:30:10 GMT 2012 |
Rank | 26 | Aligned Residues | 106 |
% Identity | 20% | Template | c2zbkB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; |
PDBTitle: crystal structure of an intact type ii dna topoisomerase:2 insights into dna transfer mechanisms
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Resolution | 3.56 Å |
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433 | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | |
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Query Sequence |   |
F | A | A | I | V | G | N | L | L | D | N | A | F | E | A | S | L | R | S | D | . |
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T | R | A | D | E | P | G | E | H | . |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | Y | Q | T | V | R | E | L | I | E | N | S | L | D | A | T | D | V | H | G | I | L | P | N | I | K | I | T | I | D | L | I | D | D | A | R | Q | I | Y | K | V | N | V | V | D | N | G | I | G | I | P | P | Q | E | V | P | N | A | F | G | R | V | L | Y | S | S | K | Y | V | N | R | Q | T | R | G | M | Y | G | L | G |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
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507 | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | Y | L | I | A | S | Y | V | T | R | C | G | G | V | . |
I | T | L | E | D | N | D | . |
P | C | G | T | L | F | S | I | Y | I | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
V | K | A | A | V | L | Y | S | Q | M | H | Q | D | K | P | I | E | I | E | T | S | P | V | N | S | K | R | I | Y | T | F | K | L | K |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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