Job Description P77510 Confidence 100.00% Date Thu Jan 5 12:30:10 GMT 2012 Rank 1 Aligned Residues 226 % Identity 15% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

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		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.														.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	T	L	N	A	Q	L	T	Q	I	K	Q	Y	V	E	S	L	R	T	L	R	H	E	H	L	N	W	M	S	T	L	N	G	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	E	Y	D	R	V	L	A	M	V	Q	G	E	S	Q	A	Q	Q	Q	L	I	D	S	L	R	E	A	F	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S	R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F	G
Template Known Secondary structure		G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
																392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.				.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																																				.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																																				.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	R	Q	V	A	G	L	L	F	G	K	V	Q	R	A	R	E	L	G	L	K	M	I	I	V	.	.	.	P	G	S	Q	L	S	Q	L	P	P	G	L	D	S	T	E	F	A	A	I	V	G	N	L	L	D	N	A	F	E	A	S	L	R	S	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																																				.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.																																				.	.	.
Template Conservation
Template Sequence		H	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H	L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E	H	H	A	N
Template Known Secondary structure			B	T	T	B																										S												S	S	S	T	T	S																														S	T	T
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500										.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.
Query Sequence		D	E	G	N	K	I	V	E	L	F	L	S	D	E	G	D	D	V	V	I	E	V	A	D	Q	G	C	G	V	P	E	S	L	R	D	K	I	F	E	Q	G	V	S	T	R	A	D	E	P	.	.	.	.	.	.	.	.	.	G	E	H	G	I	G	L	Y	L	I	A	S	Y	V	T	R	C	G	G	V	I	T
Query Conservation																																																			.	.	.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K
Template Known Secondary structure		T	T													S	S										S									G	G	G	G		T	T	T	T							S	S			S				S	S		T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	D	N	D	P	C	G	T	L	F	S	I	Y	I	P	K	V	K	P	N	D	S	S	I	N	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A	L	S	T	D	S	I	E	R	L	P	V
Template Known Secondary structure						T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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