Job Description P77510 Confidence 99.59% Date Thu Jan 5 12:30:10 GMT 2012 Rank 27 Aligned Residues 105 % Identity 19% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.			.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																																	.	.
Query SS confidence																																				.																																	.	.
Query Sequence		F	A	A	I	V	G	N	L	L	D	N	A	F	E	A	S	L	R	S	D	E	G	N	K	I	V	E	L	F	L	S	D	E	G	.	D	D	V	V	I	E	V	A	D	Q	G	C	G	V	P	E	S	L	R	D	K	I	F	E	Q	G	V	S	T	R	A	D	.	.	E	P	G	E	H	G	I	G	L	Y	L
Query Conservation																																				.																																	.	.
Alig confidence																						.														.																																	.	.
Template Conservation																						.
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	.	I	L	P	D	I	L	V	Q	V	E	R	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q	G	I	G	I	S	A
Template Known Secondary structure																		T	T	T	S	.		S											T	T	T										S					G	G	G						S													S	S	S	S
Template Predicted Secondary structure																						.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520		.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure													.							.
Query SS confidence													.							.
Query Sequence		I	A	S	Y	V	T	R	C	G	G	V	.	I	T	L	E	D	N	.	D	P	C	G	T	L	F	S	I	Y	I	P
Query Conservation													.							.
Alig confidence													.							.
Template Conservation
Template Sequence		A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M
Template Known Secondary structure										T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions