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Job DescriptionP77510
Confidence100.00%DateThu Jan 5 12:30:10 GMT 2012
Rank4Aligned Residues220
% Identity17%Templatec1y8oA_
PDB info PDB header:transferaseChain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   325....330.........340.........350.........360. ........370.........380........
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Query Sequence  ISTLNAQLTQIKQYVESLRTLRHEHLNWMSTLNGLLQ. . . . . . . . . . . . . . . MKEYDRVLAMVQGESQAQQQLIDSLRE.
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Template Sequence  LEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLL
Template Known Secondary structure  GGGG

TT
GGG


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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   389390.........400.........410.. .......420.........430.........440...
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Query Sequence  . . . . . . . . . . . . . . . . . . . AFADRQVAGLLFGKVQRARELGLK. . . . . . MIIVPGSQLSQLPPGLDSTEFAAIVGNLLDN
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Template Sequence  FGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKN
Template Known Secondary structure  S

SS
SSTTSBTTBS



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   172.......180.........190.........200.........210.........220.........230.........240.........250.
 
   444.....450. ........460.........470.........480.........490.........500.........510.........
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Query Sequence  AFEASLRS. . . . DEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEPGEHGIGLYLIASYVTRCGG
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Template Sequence  SMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSP. . . . . . LFGYGLPISRLYARYFQG
Template Known Secondary structure  TT
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SS
S



GGGG
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   252.......260.........270.........280.........290.........300....... ..310.........320.....
 
   520.........530.........540.........550
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Query Sequence  VITLEDNDPCGTLFSIYIPKVKPNDSSINPI
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Template Sequence  DLKLYSMEGVGTDAVIYLKALSSESFERLPV
Template Known Secondary structure  TTTS
GGG
B




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   341........350.........360.........370.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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