Job Description P77510 Confidence 100.00% Date Thu Jan 5 12:30:10 GMT 2012 Rank 4 Aligned Residues 220 % Identity 17% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.																.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		I	S	T	L	N	A	Q	L	T	Q	I	K	Q	Y	V	E	S	L	R	T	L	R	H	E	H	L	N	W	M	S	T	L	N	G	L	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	E	Y	D	R	V	L	A	M	V	Q	G	E	S	Q	A	Q	Q	Q	L	I	D	S	L	R	E	.
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation
Template Sequence		L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y	T	N	R	I	S	F	R	M	L	I	N	Q	H	T	L	L
Template Known Secondary structure			G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
																					389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.							.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	A	D	R	Q	V	A	G	L	L	F	G	K	V	Q	R	A	R	E	L	G	L	K	.	.	.	.	.	.	M	I	I	V	P	G	S	Q	L	S	Q	L	P	P	G	L	D	S	T	E	F	A	A	I	V	G	N	L	L	D	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V	Y	V	P	S	H	L	F	H	M	L	F	E	L	F	K	N
Template Known Secondary structure			S			S	S		S	S	T	T	S	B	T	T	B																										S												T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		444	.	.	.	.	.	450	.					.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		A	F	E	A	S	L	R	S	.	.	.	.	D	E	G	N	K	I	V	E	L	F	L	S	D	E	G	D	D	V	V	I	E	V	A	D	Q	G	C	G	V	P	E	S	L	R	D	K	I	F	E	Q	G	V	S	T	R	A	D	E	P	G	E	H	G	I	G	L	Y	L	I	A	S	Y	V	T	R	C	G	G
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																																													.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	.	L	F	G	Y	G	L	P	I	S	R	L	Y	A	R	Y	F	Q	G
Template Known Secondary structure											T	T		S	S													S	S										S									G	G	G	G		T	T	T			.	.	.	.	.	.			T	T												T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	L	E	D	N	D	P	C	G	T	L	F	S	I	Y	I	P	K	V	K	P	N	D	S	S	I	N	P	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E	R	L	P	V
Template Known Secondary structure									T	T	T										S		G	G	G		B
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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