Job Description P77510 Confidence 97.87% Date Thu Jan 5 12:30:10 GMT 2012 Rank 60 Aligned Residues 76 % Identity 29% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.									.	.	.	.	.	.	490	.	.	.	.								.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		F	A	A	I	V	G	N	L	L	D	N	A	F	E	A	S	L	R	S	D	E	G	N	K	I	V	E	L	F	L	S	D	E	G	D	D	V	V	I	E	V	A	D	Q	G	C	G	V	P	E	S	.	.	.	.	.	.	.	.	L	R	D	K	I	F	E	Q	G	V	S	.	.	.	.	.	.	.	T	R	A
Query Conservation																																																					.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence																					.																	.	.														.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation																					.																	.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	.	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T	S	S	N	Y	D	D	D	E	K	K
Template Known Secondary structure																					.	T	T										T	T	T	T		.	.							S	S					S	B		T	T	T		S	B								S	S	S			S				T	T	S
Template Predicted Secondary structure																					.																	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		498	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	P	G	E	H	G	I	G	L	Y	L	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	G	R	N	G	Y	G	A	K	L	C	N
Template Known Secondary structure				S			S	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions