Return to main results Retrieve Phyre Job Id

Job DescriptionP77510
Confidence98.29%DateThu Jan 5 12:30:10 GMT 2012
Rank44Aligned Residues82
% Identity20%Templatec1bknA_
PDB info PDB header:dna repairChain: A: PDB Molecule:mutl; PDBTitle: crystal structure of an n-terminal 40kd fragment of e. coli2 dna mismatch repair protein mutl
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   436...440.........450.........460.........470.........480.........490.........500 .........510..
Predicted Secondary structure 





















...



Query SS confidence 
































































. . .











Query Sequence  IVGNLLDNAFEASLRSDEGNKIVELFLSDEGDDVVIEVADQGCGVPESLRDKIFEQGVSTRADEP. . . GEHGIGLYLIAS
Query Conservation 

 


 



           
 
        
 
 
 
 
 

  
 
  


 
  
     ... 





 

  
Alig confidence 














......






.



































...









..
Template Conservation 











 

...... 
 
 
 .  
   
 
 


 

   

    
     

    
 






 

..
Template Sequence  VVKELVENSLDAGAT. . . . . . RIDIDIE. RGGAKLIRIRDNGCGIKKDELALALAIASLDDLEAIISLGFRGEALASI. .
Template Known Secondary structure  TT
S.......TTTTSSS





TTTS
GGG
..
Template Predicted Secondary structure 



.......





















..
Template SS confidence 















































































   26...30.........40 ....... ..50.........60.........70.........80.........90......
 
   513......520.........
Predicted Secondary structure 





Query SS confidence 
















Query Sequence  YVTRCGGVITLEDNDPC
Query Conservation 

    
 
 
 
  
 
Alig confidence  ...













Template Conservation  ...   
 
 
 

   
Template Sequence  . . . SSVSRLTLTSRTAE
Template Known Secondary structure  ...TTS



SS
Template Predicted Secondary structure  ...



Template SS confidence 
















   103......110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions