Job Description P71244 Confidence 71.62% Date Thu Jan 5 12:12:40 GMT 2012 Rank 16 Aligned Residues 240 % Identity 19% Template d1ogmx2 SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Dextranase, catalytic domain Resolution 1.8

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																									.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	G	Q	T	V	V	V	P	A	G	L	V	C	D	N	I	N	T	G	I	F	I	P	P	G	K	T	L	H	I	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	R	G	N	G	R	G	R	F	V	L	Q	D	G	S	Q	V	T	G	E	D	G
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		S	N	T	Y	W	V	Y	L	A	P	G	A	Y	V	K	.	.	.	G	A	I	E	Y	F	T	K	Q	N	F	Y	A	T	G	H	G	I	L	S	G	E	N	Y	V	Y	Q	A	N	A	G	D	N	Y	I	A	V	K	S	D	S	T	S	L	R	M	W	W	H	N	N	L	G	G	G	Q	T	W	Y	C	V	G
Template Known Secondary structure		T	T								T	T					.	.	.	S							S	S						S	S						T	T	S		T	T		B	T	T	T	T	T	B	S				T	T	T	B			S				S				S	S							S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure								.	.	.											.	.	.									.
Query SS confidence								.	.	.											.	.	.									.
Query Sequence		G	S	M	H	N	I	.	.	.	T	L	D	V	R	G	S	D	C	T	.	.	.	I	K	G	L	T	M	S	G	.	F	G	P	V	T	Q	I	Y	I	G	G	K	N	K	R	V	M	R	N	L	I	I	D	N	L	T	V	S	H	A	N	Y	A	I	L	R	Q	G	F	H	N	Q	I	I	G	A	N	I	T
Query Conservation								.	.	.											.	.	.									.
Alig confidence								.	.	.											.	.	.									.						.	.	.	.						.	.																							.	.	.	.	.
Template Conservation																																						.	.	.	.						.	.																							.	.	.	.	.
Template Sequence		P	T	I	N	A	P	P	F	N	T	M	D	F	N	G	N	S	G	I	S	S	Q	I	S	D	Y	K	Q	V	G	A	F	F	F	Q	T	.	.	.	.	D	G	P	E	I	.	.	Y	P	N	S	V	V	H	D	V	F	W	H	V	N	D	D	A	I	K	I	Y	Y	.	.	.	.	.	S	G	A	S	V	S
Template Known Secondary structure								S	S							S	S	S																S	T	T		.	.	.	.				B		.	.		T	T											S	S		S					S	.	.	.	.	.	T	T
Template Predicted Secondary structure																																						.	.	.	.						.	.																							.	.	.	.	.
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.					.	.	.	.	380			.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.						.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.																				.
Query SS confidence																																													.	.	.	.	.																				.
Query Sequence		N	C	K	F	S	D	L	Q	G	D	A	I	E	W	N	V	A	I	N	D	R	D	I	L	I	S	D	H	V	I	E	R	I	N	C	T	N	G	K	I	N	W	G	.	.	.	.	.	I	G	I	G	L	A	G	S	T	Y	D	N	N	Y	P	E	D	Q	A	.	V	K	N	F	V	V	A	N	I	T	G	S
Query Conservation																																													.	.	.	.	.																				.
Alig confidence														.	.	.																													.	.	.	.	.																				.
Template Conservation														.	.	.
Template Sequence		R	A	T	I	W	K	C	H	N	D	P	I	.	.	.	I	Q	M	G	W	T	S	R	D	I	S	G	V	T	I	D	T	L	N	V	I	H	T	R	Y	I	K	S	E	T	V	V	P	S	A	I	I	G	A	S	P	F	Y	A	S	G	M	S	P	D	S	R	K	S	I	S	M	T	V	S	N	V	V	C	E
Template Known Secondary structure									S	S	S		S	.	.	.					S	S																				S	S			T	T	T	T										S	S	S	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420				.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		257	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure									.	.	.	.
Query SS confidence									.	.	.	.
Query Sequence		D	C	R	Q	L	I	H	.	.	.	.	V	E	N	G	K	H	F	V	I	R	N	I	K	A	R	N	I	T	P	D	F	S	K	K	A	G	I	D	N	A	T	V	A	I	Y	G	C	D	N	F	V	I	D	N	I	E	M
Query Conservation									.	.	.	.
Alig confidence									.	.	.	.
Template Conservation
Template Sequence		G	L	C	P	S	L	F	R	I	T	P	L	Q	N	Y	K	N	F	V	V	K	N	V	A	F	P	D	G	L	Q	T	N	S	I	G	T	G	E	S	I	I	P	A	A	S	G	L	T	M	G	L	A	I	S	A	W	T	I
Template Known Secondary structure		S	S	B									S														T	T		B			S	T	T		T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions