Job Description P71244 Confidence 95.49% Date Thu Jan 5 12:12:40 GMT 2012 Rank 12 Aligned Residues 267 % Identity 21% Template d1ia5a_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 2.00

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		44	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure														.	.	.	.	.																																		.	.	.							.	.
Query SS confidence														.	.	.	.	.																																		.	.	.							.	.
Query Sequence		D	W	I	A	S	F	K	Q	A	F	S	E	.	.	.	.	.	G	Q	T	V	V	V	P	A	G	L	V	C	D	N	I	N	T	G	I	F	I	P	P	G	K	T	L	H	I	L	G	S	L	.	.	.	R	G	N	G	R	G	.	.	R	F	V	L	Q	D	G	S	Q	V	T	G	E	D	G	G	S	M	H
Query Conservation														.	.	.	.	.																																		.	.	.							.	.
Alig confidence														.	.	.	.	.																	.	.	.	.														.	.	.							.	.
Template Conservation																																			.	.	.	.
Template Sequence		N	G	A	S	S	A	S	K	S	K	T	S	C	S	T	I	V	L	S	N	V	A	V	P	S	G	T	T	L	D	L	T	K	.	.	.	.	L	N	D	G	T	H	V	I	F	S	G	E	T	T	F	G	Y	K	E	W	S	G	P	L	I	S	V	S	G	S	D	L	T	I	T	G	A	S	G	H	S	I	N
Template Known Secondary structure		G									G	G	G		S						S					T	T							S	.	.	.	.			T	T							S									S				S							S							T	T
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		114																				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	L	D	V	R	G	S	D	C	T	I	K	G	L	T	M	S	G	F	G	P	V	T	Q	I	Y	I	G	G	K	N	K	R	V	M	R	N	L	I	I	D	N	L	T	V	S	H	.	.	.	.	A	N	Y	A	I	L	R	Q
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.												.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		G	D	G	S	R	W	W	D	G	E	G	G	N	G	G	K	T	K	P	K	F	F	A	A	H	S	L	T	N	S	V	I	S	G	L	K	I	V	N	S	P	V	Q	V	F	S	V	A	G	S	D	.	.	.	.	.	.	Y	L	T	L	K	D	I	T	I	D	N	S	D	G	D	D	N	G	G	H	N	T	D
Template Known Secondary structure				G	G	G	T		S	S		T	T	T	S	S	S																		S							S	S							S			.	.	.	.	.	.						S						G	G	G	T	T	T	T			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		G	F	H	N	Q	I	.	I	G	A	N	I	T	N	C	K	F	S	D	L	Q	G	D	A	I	E	W	N	V	A	I	N	D	R	D	I	L	I	S	D	H	V	I	E	R	I	N	C	T	N	G	K	I	N	W	G	I	G	I	G	L	A	G	S	T	Y	D	N	N	Y	P	E	D	Q	A	V	K	N	F	V
Query Conservation								.
Alig confidence								.													.											.	.	.	.	.	.	.	.														.	.	.															.	.	.	.	.	.
Template Conservation																					.											.	.	.	.	.	.	.	.														.	.	.															.	.	.	.	.	.
Template Sequence		A	F	D	I	G	T	S	T	Y	V	T	I	S	G	A	T	V	Y	N	.	Q	D	D	C	V	A	V	N	S	G	.	.	.	.	.	.	.	.	E	N	I	Y	F	S	G	G	Y	C	S	G	G	.	.	.	H	G	L	S	I	G	S	V	G	G	R	S	D	N	.	.	.	.	.	.	T	V	K	N	V	T
Template Known Secondary structure		S					S								S						.	S	S		S				S	S		.	.	.	.	.	.	.	.							S					S	S	.	.	.	S									S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure																					.											.	.	.	.	.	.	.	.														.	.	.															.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.
		250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																															.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																															.	.	.	.	.	.	.	.	.
Query Sequence		V	A	N	I	T	.	.	G	S	D	C	R	Q	L	I	H	V	E	N	G	K	H	F	V	I	R	N	I	K	A	R	N	I	T	P	D	F	S	K	K	A	G	I	D	N	A	T	V	A	I	Y	G	C	.	.	.	.	.	.	.	.	.	D	N	F	V	I	D	N	I	E	M	I	N	S	A	G	M	L	I
Query Conservation							.	.																																															.	.	.	.	.	.	.	.	.
Alig confidence							.	.																																															.	.	.	.	.	.	.	.	.																	.	.
Template Conservation																																																																																.	.
Template Sequence		F	V	D	S	T	I	I	N	S	D	N	G	V	R	I	K	T	N	I	D	T	T	G	S	V	S	D	V	T	Y	K	D	I	T	L	T	S	I	A	K	Y	G	I	V	V	Q	Q	N	Y	G	D	T	S	S	T	P	T	T	G	V	P	I	T	D	F	V	L	D	N	V	H	G	S	V	V	S	S	G	.	.
Template Known Secondary structure									S		S									T	T																			S	S										T		T	T	S				S	S	S																T	T	S	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	G	V	I	K	G	K	Y	L	S	I	P	Q	N	F	R	V	N	D	I	Q	L	D	N	T	H	L
Query Conservation
Alig confidence		.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	N	I	L	I	S	C	G	S	G	S	C	S	D	W	T	W	T	D	V	S	V
Template Known Secondary structure		.	.	.	.	.	.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions