Job Description P71244 Confidence 97.77% Date Thu Jan 5 12:12:40 GMT 2012 Rank 3 Aligned Residues 260 % Identity 17% Template d1bhea_ SCOP info Single-stranded right-handed beta-helix Pectin lyase-like Galacturonase Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																		.	.	.	.
Query SS confidence												.	.	.																																		.	.	.	.
Query Sequence		D	W	I	A	S	F	K	Q	A	F	.	.	.	S	E	G	Q	T	V	V	V	P	A	G	L	V	C	D	N	I	N	T	G	I	F	I	P	P	G	K	T	L	H	I	L	G	.	.	.	.	S	L	R	G	N	G	R	G	R	F	V	L	Q	D	G	S	Q	V	T	G	E	D	G	G	S	M	H	N	I	T
Query Conservation												.	.	.																																		.	.	.	.
Alig confidence												.	.	.																																		.	.	.	.
Template Conservation
Template Sequence		T	A	T	S	T	I	Q	K	A	L	N	N	C	D	Q	G	K	A	V	R	L	S	A	G	S	T	S	V	F	L	S	G	P	L	S	L	P	S	G	V	S	L	L	I	D	K	G	V	T	L	R	A	V	N	N	A	K	S	F	E	N	A	P	S	S	C	G	V	V	D	K	N	G	K	G	C	D	A	F	I
Template Known Secondary structure		B										T	T			T	T								S	S	S	S					S						T	T							T	T							S		S	G	G	G	B	S	S	T	T		S	S				S		S			B			S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																									150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	V	R	G	S	D	C	T	I	K	G	L	T	M	S	G	F	G	P	V	T	Q	I	Y	I	G	G	K	N	K	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	R	N	L	I	I	D	N	L	T	V	S	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.
Template Sequence		T	A	V	S	T	T	N	S	G	I	Y	G	P	G	T	.	.	I	D	G	Q	G	G	V	K	L	Q	D	K	K	V	S	W	W	E	L	A	A	D	A	K	V	K	K	L	K	Q	N	T	P	R	L	I	Q	I	N	K	S	K	N	F	T	L	Y	N	V	S	L	I	N	S	P	N	F	H	V	V	F	S	D
Template Known Secondary structure					S		B	S						S	S		.	.					T	T	S			S	S	S	S	S		T	T										T								S					S															S	S		S					S
Template Predicted Secondary structure																	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
													163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	A	N	Y	A	I	L	R	Q	G	F	H	N	Q	I	I	G	A	N	.	.	.	I	T	N	C	K	F	S	D	L	Q	G	D	A	I	E	W	N	V	A	I	N	D	R	D	I	L	I	S	D	H	V	I	E	R	I	N	C	T	N	G	K	I	N	W	G	I	G	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																			.	.	.								.										.	.																						.	.	.
Template Conservation																																									.										.	.																						.	.	.
Template Sequence		G	D	G	F	T	A	W	K	T	T	I	K	T	P	S	T	A	R	N	T	D	G	I	D	P	M	S	S	K	N	I	T	I	A	Y	S	N	I	A	.	T	G	D	D	N	V	A	I	K	.	.	A	Y	K	G	R	A	E	T	R	N	I	S	I	L	H	N	D	F	G	T	G	.	.	.	H	G	M	S	I
Template Known Secondary structure																T	T		S	S			S					S								S					.		S	S		S					.	.			T	T	S															S	S	.	.	.	S
Template Predicted Secondary structure																																									.										.	.																						.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250				.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.																				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.								.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		G	L	A	G	S	T	Y	D	N	N	Y	P	E	D	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	K	N	F	V	V	A	N	I	T	G	S	D	C	R	Q	L	I	H	V	.	.	.	.	.	.	.	E	N	G	K	H	F	V	I	R	N	I	K	A	R	N	I	T	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		G	S	E	T	M	G	V	Y	N	V	T	V	D	D	L	K	M	N	G	T	T	N	G	L	R	I	K	S	D	K	S	A	A	G	V	V	N	G	V	R	Y	S	N	V	V	M	K	N	V	A	K	P	I	V	I	D	T	V	Y	E	K	K	E	G	S	N	V	P	D	W	S	D	I	T	F	K	D	V	T	.
Template Known Secondary structure						S	S													S		S									T	T	T																S		S							T	T	S	S																				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.						300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		D	F	S	K	K	A	G	I	D	N	A	T	V	A	I	Y	G	.	.	.	.	.	C	D	N	F	V	I	D	N	I	E	M	I	N	S	A	G	M	L	I
Query Conservation																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.												.	.	.	.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	S	E	T	K	G	V	V	V	L	N	G	E	N	A	K	K	P	I	E	V	T	M	K	N	V	K	L	T	S	D	S	T	W	Q	I
Template Known Secondary structure		.	.	.	.	.	.			S									T	T		S	S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions