Job Description P71244 Confidence 98.51% Date Thu Jan 5 12:12:40 GMT 2012 Rank 1 Aligned Residues 345 % Identity 14% Template c3jurA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exo-poly-alpha-d-galacturonosidase; PDBTitle: the crystal structure of a hyperthermoactive exopolygalacturonase from2 thermotoga maritima Resolution 2.05 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.					.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure																	.				.	.	.	.								.	.	.	.	.																																								.	.	.	.	.	.
Query SS confidence																	.				.	.	.	.								.	.	.	.	.																																								.	.	.	.	.	.
Query Sequence		L	P	A	R	Q	S	V	N	I	N	D	Y	N	P	H	.	D	W	I	.	.	.	.	A	S	F	K	Q	A	F	.	.	.	.	.	S	E	G	Q	T	V	V	V	P	A	G	L	V	C	D	N	I	N	T	G	I	F	I	P	P	G	K	T	L	H	I	L	G	S	L	R	G	N	G	.	.	.	.	.	.
Query Conservation																	.				.	.	.	.								.	.	.	.	.																																								.	.	.	.	.	.
Alig confidence						.											.				.	.	.	.								.	.	.	.	.														.	.	.																								.	.	.	.	.	.
Template Conservation						.																																												.	.	.
Template Sequence		I	P	D	R	.	E	V	N	L	L	D	F	G	A	R	G	D	G	R	T	D	C	S	E	S	F	K	R	A	I	E	E	L	S	K	Q	G	G	G	R	L	I	V	P	E	G	V	F	.	.	.	L	T	G	P	I	H	L	K	S	N	I	E	L	H	V	K	G	T	I	K	F	I	P	D	P	E	R	Y	L
Template Known Secondary structure				S		.				G	G	G	G	T																								T								S	S			.	.	.			S						T	T						S	S								G	G	G	G
Template Predicted Secondary structure						.																																												.	.	.
Template SS confidence
		23	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.											.	.
Query SS confidence																						.	.	.	.											.	.
Query Sequence		R	G	R	F	V	L	Q	D	G	S	Q	V	T	G	E	D	G	G	S	M	.	.	.	.	H	N	I	T	L	D	V	R	G	S	.	.	D	C	T	I	K	G	L	T	M	S	G	F	G	P	V	T	Q	I	Y	I	G	G	K	N	K	R	V	M	R	N	L	I	I	D	N	L	T	V	S	H	A	N	Y	A
Query Conservation																						.	.	.	.											.	.
Alig confidence																						.	.	.	.											.	.
Template Conservation
Template Sequence		P	V	V	L	T	R	F	E	G	I	E	L	Y	N	Y	S	P	L	V	Y	A	L	D	C	E	N	V	A	I	T	G	S	G	V	L	D	G	S	A	D	N	E	H	W	W	P	W	K	G	K	K	D	F	G	W	K	E	G	L	P	N	Q	Q	E	D	V	K	K	L	K	E	M	A	E	R	G	T	P	V	E
Template Known Secondary structure		S							T	T						S			S					S								S	S								B	T	T	B	B	G	G	G	G			G	G	G	T			T	T	S			S														T			G	G
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		I	L	R	Q	G	F	H	N	Q	I	I	G	A	N	I	T	N	C	K	F	S	D	L	Q	G	D	A	I	E	W	.	N	V	A	I	N	D	R	D	I	L	I	S	D	H	V	I	E	R	I	N	C	T	N	G	K	I	N	W	G	I	G	I	G	L	A	G	S	T	Y	D	N	N	Y	P	E	D	Q	A	V
Query Conservation																																.
Alig confidence																																.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	V	F	G	K	G	H	Y	L	R	P	S	F	V	Q	F	Y	R	C	R	N	V	L	V	E	G	V	K	I	I	N	S	P	M	W	C	I	H	P	V	L	S	E	N	V	I	I	R	N	I	E	I	S	S	T	G	P	N	N	D	G	I	D	P	E	S	C	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G		B		S	T	T							S					S								S					S		S	S		S					S								S							S	T	T			S	B			B	S		.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.													.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290					.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		K	N	F	V	V	A	N	I	T	G	S	D	C	R	Q	L	I	H	V	.	.	.	.	.	.	.	.	.	.	.	.	E	N	G	K	H	F	V	I	R	N	I	K	A	R	N	I	T	P	D	F	S	K	K	A	G	I	.	.	.	.	D	N	A	T	V	A	I	Y	G	C	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	M	L	I	E	K	C	R	F	D	T	G	D	D	S	V	V	I	K	S	G	R	D	A	D	G	R	R	I	G	V	P	S	E	Y	I	L	V	R	D	N	L	V	I	S	Q	A	S	H	G	G	L	V	I	G	S	E	M	S	G	G	V	R	N	V	V	A	R	N	N	V	Y	M	N	V	E	R	A	L
Template Known Secondary structure								S						S	S						B																					S						S	S		S							S	S		T	T									S					S		S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
														301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	N	F	V	I	D	N	I	E	M	I	N	S	A	G	M	L	I	G	.	.	.	.	Y	G	V	I	K	G	K	Y	L	S	I	P	Q	N	F	R	V	N	D	I	Q	L	D	N	T	H	L	A	Y	K	L	R	G	I	Q	I	S	A	G	N	A	V	S	F	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.																																		.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		R	L	K	T	N	S	R	R	G	G	Y	M	E	N	I	F	F	I	D	N	V	A	V	N	V	S	E	E	V	I	R	I	N	L	R	Y	D	N	E	E	G	E	Y	L	P	V	V	R	S	V	F	V	K	N	L	K	A	T	G	G	K	Y	A	V	R	I	E	G	.	.	.	L	E	N	D	Y	V	K	D	I
Template Known Secondary structure							T	T	T		S									S							S	S							S		G	G	G				S												S							S								.	.	.	B	T	T	B
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.				.	.	.	.	.	400	.	.	.
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	N	I	E	M	K	R	A	S	L	E	L	H	N	K	P	Q	H	F	F	M	R	N	I	N	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	S	D	T	I	I	E	G	A	K	I	S	V	L	L	E	F	G	Q	L	G	M	E	N	V	I	M
Template Known Secondary structure										S		S
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.