Job Description P71244 Confidence 95.64% Date Thu Jan 5 12:12:40 GMT 2012 Rank 9 Aligned Residues 257 % Identity 21% Template c1czfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:polygalacturonase ii; PDBTitle: endo-polygalacturonase ii from aspergillus niger Resolution 1.68 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		G	Q	T	V	V	V	P	A	G	L	V	C	D	N	I	N	T	G	I	F	I	P	P	G	K	T	L	H	I	L	G	S	L	R	G	N	.	.	.	.	.	G	R	G	R	F	V	L	Q	D	G	S	Q	V	T	G	E	D	G	G	S	M	H	N	I	T	L	D	V	R	G	S	D	C	T	I	K	G	L	T
Query Conservation																																						.	.	.	.	.
Alig confidence															.	.	.	.																				.	.	.	.	.																				.	.	.	.	.
Template Conservation															.	.	.	.																																												.	.	.	.	.
Template Sequence		L	N	N	I	E	V	P	A	G	T	T	L	D	.	.	.	.	L	T	G	L	T	S	G	T	K	V	I	F	E	G	T	T	T	F	Q	Y	E	E	W	A	G	P	L	I	S	M	S	G	E	H	I	T	V	T	G	A	S	G	H	.	.	.	.	.	L	I	N	C	D	G	A	R	W	W	D	G	K	G	T
Template Known Secondary structure				S					T	T					.	.	.	.			S			T	T							S									S				S							S							T	T		.	.	.	.	.						G	G	G	T			S		T	T
Template Predicted Secondary structure															.	.	.	.																																												.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.					.	.	.	.	200	.	.
Predicted Secondary structure																																			.																											.	.	.							.	.	.	.
Query SS confidence																																			.																											.	.	.							.	.	.	.
Query Sequence		M	S	G	F	G	P	V	T	Q	I	Y	I	G	G	K	N	K	R	V	M	R	N	L	I	I	D	N	L	T	V	S	H	A	.	N	Y	A	I	L	R	Q	G	F	H	N	Q	I	I	G	A	N	I	T	N	C	K	F	S	D	L	.	.	.	Q	G	D	A	I	E	.	.	.	.	W	N	V	A	I	N	D
Query Conservation																																			.																											.	.	.							.	.	.	.
Alig confidence															.	.	.	.	.	.															.																											.	.	.							.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		S	G	K	K	K	P	K	F	F	Y	A	H	G	.	.	.	.	.	.	L	D	S	S	S	I	T	G	L	N	I	K	N	T	P	L	M	A	F	S	V	Q	A	N	D	I	T	F	T	D	V	T	I	N	N	A	D	G	D	T	Q	G	G	H	N	T	D	A	F	D	V	G	N	S	V	G	V	N	I	I	K
Template Known Secondary structure		S	S	S											.	.	.	.	.	.			T					S							S	S		S												S						G	G	G	G	T	T	T			S			S					S								S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.							.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.								.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																						.	.
Query SS confidence																							.	.	.	.	.	.	.																																						.	.
Query Sequence		R	D	I	L	I	S	D	H	V	I	E	R	I	N	C	T	N	G	K	I	N	.	.	.	.	.	.	.	W	G	I	G	I	G	L	A	G	S	T	Y	D	N	N	Y	P	E	D	Q	A	V	K	N	F	V	V	A	N	I	T	G	S	D	C	R	Q	.	.	L	I	H	V	E	N	G	K	H	F	V	I	R
Query Conservation																							.	.	.	.	.	.	.																																						.	.
Alig confidence																							.	.	.	.	.	.	.															.	.	.	.	.	.																		.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		P	W	V	H	N	Q	D	D	C	L	A	V	N	S	G	E	N	I	W	F	T	G	G	T	C	I	G	G	H	G	L	S	I	G	S	V	G	D	R	S	N	N	.	.	.	.	.	.	V	V	K	N	V	T	I	E	H	S	T	V	S	N	S	E	N	A	V	R	I	K	T	I	S	G	A	T	G	S	V	S
Template Known Secondary structure							S	S		S				S	S								S					S	S									S	S	S	S			.	.	.	.	.	.														S		S									T	T
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300																	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	I	K	A	R	N	I	T	P	D	F	S	K	K	A	G	I	D	N	A	T	V	A	I	Y	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	N	F	V	I	D	N	I	E	M	I	N	S	A	G	M	L	I	G	Y	G	V	I	K	G	K	Y	L	S	I	P	Q	N	F	R	V	N
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template Sequence		E	I	T	Y	S	N	I	V	M	S	.	.	.	.	.	G	I	S	D	Y	G	V	V	I	Q	Q	D	Y	E	D	G	K	P	T	G	K	P	T	N	G	V	T	I	Q	D	V	K	L	E	S	V	T	G	S	V	D	S	G	A	.	.	.	.	.	.	.	.	T	E	I	Y	L	L	C	G	S	G	S	C	S
Template Known Secondary structure												.	.	.	.	.			S	S											T	T				S					S																	T	T	S	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure												.	.	.	.	.																																													.	.	.	.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.						.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.	.	.	.	.
		338	.	340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	Q	L	D	N	T	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	W	T	W	D	D	V	K	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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