Return to main results Retrieve Phyre Job Id

Job DescriptionP77718
Confidence100.00%DateThu Jan 5 12:32:03 GMT 2012
Rank3Aligned Residues168
% Identity27%Templated1vbka2
SCOP infoTHUMP domain THUMP domain-like THUMP domain
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70.........
Predicted Secondary structure 












.









Query SS confidence 







































.






































Query Sequence  MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDET. LAVVRHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEV
Query Conservation 

 

  



 


 


  

  
  

   
      .  
     

 
          
   
  



   
  
Alig confidence 







































.
















...


















Template Conservation 
  







 


 
 
  

  
  


  
         
    


 
     ... 
    
  



   
  
Template Sequence  MNVVIVRYGEIGTKSRQTRSWFEKILMNNIREALVTEEVPYKEIFSRHGRIIVKTNSP. . . KEAANVLVRVFGIVSISPA
Template Known Secondary structure 



TT


SS
TT


STT
S
...TTSTT
Template Predicted Secondary structure 


















...



Template SS confidence 















































































   1........10.........20.........30.........40.........50........ .60.........70.......
 
   80.........90.........100... ......110...... ...120.........130.........140.........150...
Predicted Secondary structure 





.....




.















Query SS confidence 























. . . . .












.




































Query Sequence  EDVPFTDMHDIFEKALVQYRDQLE. . . . . GKTFCVRVKRRGK. HDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLE
Query Conservation        


 
   
         ..... 





 

  
.    
 

   

  
        


  

  
 

Alig confidence 



.


















.....












.




















.














Template Conservation    
 . 


 
   
     
          

 
  

  
 
  

 

 
 

  
     .  


  

  
 

Template Sequence  MEVE. ASLEKINRTALLMFRKKAKEVGKERPKFRVTARRITKEFPLDSLEIQAKVGEYILNNEN. CEVDLKNYDIEIGIE
Template Known Secondary structure  .

T
SS
SSS
SSS
SS.

SSS
S
Template Predicted Secondary structure 
.

















.








Template SS confidence 















































































   78.80. ........90.........100.........110.........120.........130.........140 .........150.....
 
   154.....160.........170...
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  VEDDRLLLIKGRYEGIGGFP
Query Conservation 

    

      
 



Alig confidence 



















Template Conservation 
     

      
 



Template Sequence  IMQGKAYIYTEKIKGWGGLP
Template Known Secondary structure  TTS




S

Template Predicted Secondary structure 








Template SS confidence 



















   156...160.........170.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions