Job Description P77718 Confidence 99.40% Date Thu Jan 5 12:32:03 GMT 2012 Rank 40 Aligned Residues 177 % Identity 17% Template c3q4gA_ PDB info PDB header:ligase Chain: A: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: structure of nad synthetase from vibrio cholerae Resolution 2.40 Å

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.												200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	.	.	.	.	.	.	.	.	.	.	.	R	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.	.
Template Sequence		Y	K	S	L	V	L	G	I	S	G	G	V	D	S	T	T	C	G	R	L	A	Q	L	A	V	E	E	L	N	Q	Q	H	N	T	T	E	Y	Q	F	I	A	V	R	L	P	Y	G	E	Q	K	D	E	D	E	A	Q	L	A	L	S	F	I	.	.	.	.	.	.	.	R	P	T	H	S	V	S	V	N	I	K
Template Known Secondary structure											S	S																					T	T		S											S	S	S		S													.	.	.	.	.	.	.			S
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.								.	100	.	.	.	.	.	.	.	.	.
		246	.	.	.									250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.									.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		P	V	V	G	.	.	.	.	.	.	.	.	E	I	L	E	K	I	D	D	G	Q	M	G	V	I	L	K	.	.	.	.	.	.	.	.	R	M	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D
Query Conservation						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.																								.	.	.	.	.					.
Template Conservation																																																													.	.	.	.	.					.
Template Sequence		A	G	V	D	G	L	H	A	A	S	H	H	A	L	A	N	T	G	L	I	P	S	D	P	A	K	V	D	F	I	K	G	N	V	K	A	R	A	R	X	V	A	Q	Y	E	I	A	G	Y	V	G	G	L	V	L	G	T	D	H	.	.	.	.	.	S	A	E	N	.	I	T	G	F	Y	T	K	F	G	D	G
Template Known Secondary structure																			T		S		S	S																												T				B					.	.	.	.	.					.			T		S		T	T	T	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.					.
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.						.	170	.	.		.	.	.	.	.	.	.	180	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.		.	.	340	.	.	.	.							.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																										.	.					.								.	.	.	.	.	.				.
Query SS confidence																										.	.					.								.	.	.	.	.	.				.
Query Sequence		T	L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R	Q	I	G	T	.	.	E	D	F	A	.	R	T	M	P	E	Y	C	.	.	.	.	.	.	G	V	I	.	S	K	S	P	T	V	K	A	V	K	S	K	I	E	A	E	E	E	K
Query Conservation																										.	.					.								.	.	.	.	.	.				.
Alig confidence																										.	.					.								.	.	.	.	.	.				.
Template Conservation
Template Sequence		A	C	D	L	A	P	L	F	G	L	N	K	R	Q	V	R	L	L	A	K	T	L	G	A	P	E	Q	L	V	Y	K	T	P	T	A	D	L	N	L	T	Y	E	Q	I	D	D	F	L	E	G	K	A	V	P	A	E	V	S	Q	R	L	V	A	I	Y	H	A
Template Known Secondary structure				S	B		T	T	T	T													T	T							T				S																T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions