Job Description P77718 Confidence 98.69% Date Thu Jan 5 12:32:03 GMT 2012 Rank 86 Aligned Residues 165 % Identity 20% Template c3n05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:nh(3)-dependent nad(+) synthetase; PDBTitle: crystal structure of nh3-dependent nad+ synthetase from streptomyces2 avermitilis Resolution 2.35 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	.	.	G	C	R	V	H	Y	C	F	F	N	L	G	G	A	A	H	E	I	G	V	R	Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	G	E	I	L	E	K	I
Query Conservation																									.	.
Alig confidence																									.	.											.																			.	.	.	.	.
Template Conservation																																					.																			.	.	.	.	.
Template Sequence		R	S	V	L	I	G	L	S	G	G	I	D	S	A	L	V	A	A	I	A	C	D	A	L	G	A	Q	N	V	Y	G	V	S	M	P	.	S	K	Y	S	S	D	H	S	K	G	D	A	A	E	L	A	R	R	.	.	.	.	.	T	G	L	N	F	R	T	V	S	I	E	P	M	F	D	A	Y	M	A	S	L
Template Known Secondary structure										S	S																G	G	G								.		T	T															T	.	.	.	.	.	T	T								S											S
Template Predicted Secondary structure																																					.																			.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.						.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		256	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.					.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																													.	.	.	.
Query SS confidence							.	.																													.	.	.	.
Query Sequence		D	D	G	Q	M	.	.	G	V	I	L	K	R	M	M	V	R	A	A	S	K	V	A	E	R	Y	G	V	Q	A	L	V	T	G	E	.	.	.	.	A	L	G	Q	V	S	S	Q	T	L	T	N	L	R	L	I	D	N	V	S	D	T	L	I	L	R	P	L	I	S	Y	D	K	E	H	I	I	N	L	A	R
Query Conservation							.	.																													.	.	.	.
Alig confidence							.	.																													.	.	.	.					.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	T	G	L	A	E	E	N	L	Q	S	R	L	R	G	T	T	L	M	A	I	S	N	Q	E	G	H	I	V	L	A	P	G	N	K	S	E	L	A	V	G	Y	.	.	.	S	S	V	.	.	.	.	.	.	.	.	.	.	.	.	G	A	Y	G	P	I	K	D	V	Y	K	T	S	I	F	R	L	A	E
Template Known Secondary structure																																B											T		.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	T	T	S
Template Predicted Secondary structure																																													.	.	.				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.				.	.	.													.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	T	E	D	F	A	R	T	M	P	E	Y	C	G	V	I	S	K	S	P	T	V	K	A	V	K	S	K	I	E	A	E	E	E	K	F	D	F	S	I	L	D	K	V	V	E	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Sequence		W	R	N	R	.	.	.	.	.	.	.	.	.	.	.	.	A	A	A	E	R	G	Q	T	P	P	I	P	E	A	.	.	.	S	I	T	K	P	D	Y	P	V	L	D	A	I	L	E	L
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.				T	T	T				S	S				.	.	.			T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template SS confidence
		469	470	.	.													.	.	.	.	.	.	.	480	.	.	.	.	.	.				.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions