Job Description P77718 Confidence 99.07% Date Thu Jan 5 12:32:03 GMT 2012 Rank 63 Aligned Residues 216 % Identity 14% Template c3ldgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative uncharacterized protein smu.472; PDBTitle: crystal structure of smu.472, a putative methyltransferase complexed2 with sah Resolution 1.96 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	K	I	L	T	G	N	I	R	N	V	L	K	H	Y	D	E	T	L	A	V	V	R	H	W	D	N	I	E	V	R	A	K	D	E	N	Q	R	L	A	I	R	D	A	L	T	R	I	P	G	I	H	H	I	L	E	V	E	D	V	P	F	T	D	M	H	D	I	F	E	K	A	L	V	Q	Y	R	D	Q
Query Conservation
Alig confidence														.	.	.	.	.	.																							.												.	.
Template Conservation														.	.	.	.	.	.																							.												.	.
Template Sequence		I	E	A	V	V	G	K	E	L	R	N	L	.	.	.	.	.	.	G	L	D	C	Q	V	E	N	G	R	V	L	F	K	G	N	I	E	T	I	A	K	.	S	N	L	W	L	R	S	A	D	R	I	.	.	K	I	V	V	G	E	F	P	A	R	T	F	E	E	L	F	Q	G	V	Y	A	L	D	W	E	N
Template Known Secondary structure													T	.	.	.	.	.	.	T							T	T														.						S	S		S			.	.										S	S											S		G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.																							.												.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.							.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		102			.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure			.	.															.																					.	.	.	.	.	.	.
Query SS confidence			.	.															.																					.	.	.	.	.	.	.
Query Sequence		L	.	.	E	G	K	T	F	C	V	R	V	K	R	R	G	K	.	H	D	F	S	S	I	D	V	E	R	Y	V	G	G	G	L	N	Q	H	I	.	.	.	.	.	.	.	E	S	A	R	V	K	L	T	N	P	D	V	T	V	H	L	E	V	E	D	D	R	L	L	L	I	K	G	R	Y	E	G	I	G	G
Query Conservation			.	.															.																					.	.	.	.	.	.	.
Alig confidence			.	.															.																					.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																																																																											.	.	.	.
Template Sequence		Y	L	P	L	G	C	Q	F	P	V	A	K	A	K	S	V	K	S	K	L	H	N	E	P	S	I	Q	G	I	T	K	K	A	I	V	K	K	L	Q	H	Y	F	H	R	P	D	S	V	P	L	P	E	N	G	P	E	F	K	I	E	I	S	L	L	K	D	Q	A	R	V	X	I	D	.	.	.	.	T	T	G
Template Known Secondary structure		T			T	T		B			B							S		S																							T	T			T	T	S						S		B									T	T								.	.	.	.	S	S	S
Template Predicted Secondary structure																																																																											.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.					.	160	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.																															.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	I	G	T	Q	E	D	V	L	S	L	I	S	G	G	F	D	S	G	V	S	S	Y	M	L	M	R	R	G	C	R	V	H	Y	C	F	F	N	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	A	H	E	I	G	V	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.
Template Sequence		P	S	L	F	K	R	G	Y	R	T	.	.	.	E	A	P	I	K	E	N	X	A	A	A	I	I	L	L	S	N	W	F	P	D	K	P	F	V	D	P	T	C	G	S	G	T	F	C	I	E	A	A	X	I	G	X	N	I	A	P	G	F	N	R	D	F	A	F	E	E	W	P	W	V	D	E	A	L	V	T
Template Known Secondary structure		S		T	T			S				.	.	.																T	T			T	T	S					T	T		T	T	S											T	T			T	T	T	T				G	G	G	G		T	T	S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	A	H	Y	L	W	N	R	F	G	S	S	H	R	V	R	F	V	A	I	N	F	E	P	V	V	G	E	I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	R	N	E	A	D	E	Q	A	D	Y	D	I	Q	L	D	I	S	G	F	D	F	D	G	R	X	V	E	I	A	R
Template Known Secondary structure													T	T										S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions